Strain Fitness in Pseudomonas simiae WCS417 around PS417_27895

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
6,012,838	+		PS417_27890	0.44	-4.1
6,013,255	+		PS417_27890	0.68	-1.1
6,013,430	-		PS417_27890	0.78	+0.8
6,013,573	+		PS417_27890	0.87	+2.1
6,013,648	+				+1.1
6,013,648	+				-1.3
6,013,648	+				+2.3
6,013,648	+				-0.6
6,013,648	+				-3.1
6,013,648	+				-0.1
6,013,649	-				-0.2
6,013,792	-				-0.5
6,013,796	+				-1.0
6,013,797	-				+1.3
6,013,797	-				+0.4
6,013,957	-		PS417_27895	0.14	-2.6
6,013,983	-		PS417_27895	0.16	-1.8
6,014,246	-		PS417_27895	0.38	+0.1
6,014,248	+		PS417_27895	0.38	-0.3
6,014,249	-				+0.1
6,014,267	+		PS417_27895	0.40	-0.1
6,014,306	+		PS417_27895	0.43	-1.1
6,014,306	+		PS417_27895	0.43	-1.1
6,014,306	+		PS417_27895	0.43	-1.6
6,014,307	-		PS417_27895	0.43	+0.2
6,014,307	-		PS417_27895	0.43	-1.3
6,014,866	+				-0.9
6,014,939	+				+0.9
6,015,412	+		PS417_27900	0.61	-1.1
6,015,412	+		PS417_27900	0.61	+0.2
6,015,629	+				-0.2
6,015,632	-				-0.6
6,015,684	+				-0.2
6,015,781	-				+1.7
6,015,967	+				+0.9
6,015,968	-				-0.8