Strain Fitness in Pseudomonas simiae WCS417 around PS417_26830

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
5,792,724	+		PS417_26820	0.86	-0.6
5,792,724	+		PS417_26820	0.86	-1.5
5,792,724	+		PS417_26820	0.86	-0.5
5,792,782	+				+0.4
5,792,926	-				+1.4
5,793,419	+		PS417_26825	0.81	-0.4
5,793,503	+				+0.6
5,793,507	-				+0.8
5,793,595	-				-0.9
5,793,622	-				-0.7
5,793,696	+				+0.2
5,793,696	+				+0.4
5,793,835	+		PS417_26830	0.23	+0.3
5,793,937	+		PS417_26830	0.33	+0.8
5,793,938	-		PS417_26830	0.33	-0.0
5,793,938	-		PS417_26830	0.33	+0.3
5,794,012	+		PS417_26830	0.41	-0.7
5,794,012	+		PS417_26830	0.41	+0.1
5,794,012	+		PS417_26830	0.41	-1.9
5,794,013	-		PS417_26830	0.41	+0.7
5,794,013	-		PS417_26830	0.41	+0.5
5,794,165	+		PS417_26830	0.56	+0.6
5,794,198	+		PS417_26830	0.59	+0.6
5,794,199	-		PS417_26830	0.59	+0.5
5,794,354	+		PS417_26830	0.75	-0.2
5,794,357	+		PS417_26830	0.75	+0.9
5,794,381	+		PS417_26830	0.78	-0.4
5,794,455	-		PS417_26830	0.85	+1.1
5,794,552	+				-1.0
5,794,553	-				-1.5
5,794,555	+				+2.1
5,794,555	+				-0.7
5,794,569	+				-0.0
5,794,626	+				+0.1
5,794,627	-				+0.0
5,794,702	+				+2.1
5,794,703	-				+0.2
5,794,703	-				-0.4
5,794,709	+				-0.0
5,794,908	-		PS417_26835	0.32	+0.2
5,795,213	-		PS417_26835	0.67	+0.6
5,795,213	-		PS417_26835	0.67	-0.5
5,795,506	+				+0.7
5,795,530	+				+0.3
5,795,531	-				+0.5
5,795,580	+				+0.1
5,795,581	-				-0.4