Strain Fitness in Pseudomonas simiae WCS417 around PS417_26785

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
5,783,771	+		PS417_26775	0.47	+0.1
5,783,771	+				+1.1
5,783,772	-		PS417_26775	0.47	+1.6
5,783,942	+		PS417_26775	0.69	-0.1
5,783,973	-		PS417_26775	0.73	-0.0
5,784,107	+		PS417_26775	0.90	+0.6
5,784,141	-				+1.6
5,784,144	+				+0.1
5,784,144	+				-1.9
5,784,174	+				-3.7
5,784,633	-		PS417_26785	0.31	+0.3
5,784,705	+		PS417_26785	0.51	-0.4
5,784,705	+		PS417_26785	0.51	+0.6
5,784,706	-		PS417_26785	0.51	+3.4
5,784,706	-		PS417_26785	0.51	+1.2
5,784,706	-		PS417_26785	0.51	+2.6
5,784,706	-		PS417_26785	0.51	+0.3
5,784,759	-		PS417_26785	0.65	+0.6
5,784,927	+				+0.4
5,784,927	+				+0.8
5,784,927	+				-0.8
5,784,927	+				+2.6
5,784,927	+				-1.9
5,784,928	-				-1.4
5,784,928	-				+0.4
5,784,928	-				+0.6
5,784,928	-				-0.1
5,784,929	+				-0.2
5,784,930	-				-0.1
5,784,930	-				-0.1
5,784,965	+				-0.6
5,784,965	+				+0.1
5,785,082	-		PS417_26790	0.16	-0.7
5,785,341	+		PS417_26790	0.52	+1.5
5,785,342	-		PS417_26790	0.52	-0.2
5,785,524	+		PS417_26790	0.77	-1.2
5,785,524	+		PS417_26790	0.77	-0.3
5,785,582	-		PS417_26790	0.85	+0.9
5,785,582	-		PS417_26790	0.85	+0.7
5,785,734	+				+0.2
5,785,734	+				-1.1