Strain Fitness in Pseudomonas simiae WCS417 around PS417_25065

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
5,434,490	-		PS417_25060	0.30	-0.4
5,434,501	-		PS417_25060	0.31	+0.5
5,434,501	-		PS417_25060	0.31	-0.2
5,434,501	-		PS417_25060	0.31	+0.9
5,434,560	+		PS417_25060	0.35	-0.5
5,434,584	+		PS417_25060	0.37	-0.8
5,434,584	+		PS417_25060	0.37	-0.2
5,434,584	+		PS417_25060	0.37	-0.1
5,434,584	+		PS417_25060	0.37	-1.0
5,434,584	+		PS417_25060	0.37	+0.5
5,434,584	+		PS417_25060	0.37	-0.7
5,434,585	-		PS417_25060	0.37	-2.2
5,434,585	-		PS417_25060	0.37	-0.2
5,434,743	-		PS417_25060	0.48	-2.4
5,434,760	-		PS417_25060	0.50	-0.4
5,434,833	+		PS417_25060	0.55	+0.1
5,434,833	+		PS417_25060	0.55	+1.6
5,434,834	-		PS417_25060	0.55	+3.0
5,434,834	-		PS417_25060	0.55	-0.9
5,434,834	-		PS417_25060	0.55	-0.4
5,434,834	-		PS417_25060	0.55	-0.2
5,434,834	-		PS417_25060	0.55	-0.3
5,434,834	-		PS417_25060	0.55	+1.2
5,434,834	-		PS417_25060	0.55	-2.1
5,434,868	-		PS417_25060	0.57	-0.2
5,434,868	-		PS417_25060	0.57	+0.8
5,434,868	-		PS417_25060	0.57	-1.0
5,434,912	-		PS417_25060	0.61	+0.7
5,435,005	+		PS417_25060	0.67	+0.3
5,435,006	-		PS417_25060	0.67	+0.1
5,435,025	+		PS417_25060	0.69	+0.2
5,435,089	+		PS417_25060	0.73	-0.7
5,435,090	-		PS417_25060	0.73	-0.7
5,435,111	+		PS417_25060	0.75	+0.6
5,435,149	-		PS417_25060	0.78	-0.3
5,435,149	-		PS417_25060	0.78	-0.7
5,435,149	-		PS417_25060	0.78	+0.5
5,435,159	-		PS417_25060	0.78	+0.1
5,435,209	+		PS417_25060	0.82	-0.6
5,435,209	+		PS417_25060	0.82	-1.4
5,435,503	+				-0.5
5,435,503	+				+0.0
5,435,503	+				-0.7
5,435,503	+				+0.2
5,435,503	+				+0.7
5,435,504	-				+0.2
5,435,504	-				-0.6
5,435,504	-				+3.2
5,435,504	-				-0.3
5,435,504	-				-0.3
5,435,504	-				+0.4
5,435,504	-				-1.2
5,435,552	+		PS417_25065	0.10	-0.9
5,435,552	+		PS417_25065	0.10	-0.9
5,435,553	-		PS417_25065	0.10	-0.9
5,435,553	-		PS417_25065	0.10	+0.5
5,435,591	-		PS417_25065	0.14	-1.5
5,435,599	+		PS417_25065	0.14	-0.0
5,435,599	+		PS417_25065	0.14	-0.1
5,435,683	-		PS417_25065	0.22	-0.2
5,435,683	-		PS417_25065	0.22	+0.7
5,435,683	-		PS417_25065	0.22	+0.6
5,435,683	-		PS417_25065	0.22	+0.9
5,435,702	+		PS417_25065	0.23	+2.2
5,435,703	-		PS417_25065	0.23	-1.0
5,435,703	-		PS417_25065	0.23	-2.3
5,435,755	+		PS417_25065	0.28	-2.3
5,435,756	-		PS417_25065	0.28	+0.4
5,435,756	-		PS417_25065	0.28	-0.7
5,435,756	-		PS417_25065	0.28	+2.9
5,435,805	-		PS417_25065	0.32	+0.5
5,435,805	-		PS417_25065	0.32	+0.6
5,435,836	+		PS417_25065	0.35	+1.3
5,435,918	+		PS417_25065	0.42	-1.1
5,435,919	-		PS417_25065	0.42	-0.4
5,435,919	-		PS417_25065	0.42	+0.6
5,436,021	+		PS417_25065	0.51	-0.8
5,436,022	-		PS417_25065	0.51	-0.3
5,436,034	+		PS417_25065	0.52	+0.0
5,436,034	+		PS417_25065	0.52	-0.1
5,436,098	+		PS417_25065	0.58	-1.5
5,436,130	-		PS417_25065	0.60	+1.0
5,436,176	+		PS417_25065	0.64	-1.2
5,436,298	+		PS417_25065	0.75	+0.2
5,436,298	+		PS417_25065	0.75	-1.4
5,436,299	-		PS417_25065	0.75	-0.2
5,436,299	-		PS417_25065	0.75	-1.4
5,436,372	+		PS417_25065	0.81	+0.4
5,436,373	-		PS417_25065	0.82	-3.2
5,436,373	-		PS417_25065	0.82	-1.1
5,436,374	+		PS417_25065	0.82	-0.4
5,436,375	-		PS417_25065	0.82	-0.7
5,436,460	-		PS417_25065	0.89	-0.4
5,436,460	-		PS417_25065	0.89	-1.2
5,436,494	+				-0.8
5,436,495	-				-0.8
5,436,549	-				-0.6
5,436,587	-				-0.2
5,436,602	-				+1.8
5,436,736	+		PS417_25070	0.14	-0.3
5,436,736	+		PS417_25070	0.14	-0.8
5,436,737	-		PS417_25070	0.14	+0.7
5,436,737	-		PS417_25070	0.14	+0.6
5,436,737	-		PS417_25070	0.14	-0.3
5,436,749	-		PS417_25070	0.15	-0.6
5,436,773	-		PS417_25070	0.17	+0.1
5,436,881	-		PS417_25070	0.27	-2.5
5,436,881	-		PS417_25070	0.27	+2.4
5,436,884	-		PS417_25070	0.28	-0.9
5,436,884	-		PS417_25070	0.28	-1.6
5,436,924	+		PS417_25070	0.31	+2.4
5,436,924	+		PS417_25070	0.31	-1.1
5,436,924	+		PS417_25070	0.31	+2.1
5,436,924	+		PS417_25070	0.31	+0.2
5,436,924	+		PS417_25070	0.31	+4.4
5,436,924	+		PS417_25070	0.31	-1.2
5,436,925	-		PS417_25070	0.31	-0.3
5,436,925	-		PS417_25070	0.31	+0.4
5,436,925	-				+0.6
5,436,925	-		PS417_25070	0.31	+0.2
5,437,001	+		PS417_25070	0.38	+1.5
5,437,001	+		PS417_25070	0.38	+3.3
5,437,002	-		PS417_25070	0.38	-0.9
5,437,002	-		PS417_25070	0.38	+0.8
5,437,029	+		PS417_25070	0.41	-0.3
5,437,029	+		PS417_25070	0.41	+0.1
5,437,029	+		PS417_25070	0.41	+0.8
5,437,029	+		PS417_25070	0.41	-0.4
5,437,029	+		PS417_25070	0.41	-0.3
5,437,030	-		PS417_25070	0.41	-0.2
5,437,032	+		PS417_25070	0.41	-0.2
5,437,032	+		PS417_25070	0.41	+0.1
5,437,032	+		PS417_25070	0.41	+0.0
5,437,173	-		PS417_25070	0.54	-0.9
5,437,250	-		PS417_25070	0.61	-0.4
5,437,250	-		PS417_25070	0.61	-0.2
5,437,259	+		PS417_25070	0.62	-2.8
5,437,300	-		PS417_25070	0.66	+1.2
5,437,300	-		PS417_25070	0.66	+0.5
5,437,345	+				-0.4
5,437,346	-		PS417_25070	0.70	+1.0
5,437,379	+				+1.6
5,437,380	-		PS417_25070	0.73	-0.7
5,437,401	+		PS417_25070	0.75	+0.6
5,437,445	-		PS417_25070	0.79	+0.4
5,437,504	-		PS417_25070	0.85	-0.1
5,437,504	-		PS417_25070	0.85	+0.8
5,437,548	+		PS417_25070	0.89	+0.0