Strain Fitness in Pseudomonas simiae WCS417 around PS417_24320

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
5,278,512	+		PS417_24315	0.72	+0.7
5,278,698	-		PS417_24315	0.85	-0.8
5,279,012	-				+0.3
5,279,012	-				+1.0
5,279,015	+				-0.1
5,279,042	-				+0.3
5,279,108	-				-1.3
5,279,118	+				-0.4
5,279,145	-				+0.6
5,279,181	+				-0.1
5,279,182	-				-0.5
5,279,209	-				-0.3
5,279,224	-				+0.7
5,279,265	+				-0.0
5,279,265	+				+0.4
5,279,266	-		PS417_24320	0.10	-0.0
5,279,266	-		PS417_24320	0.10	-1.9
5,279,287	+		PS417_24320	0.15	-1.6
5,279,293	-		PS417_24320	0.16	+0.1
5,279,333	+		PS417_24320	0.26	-0.8
5,279,334	-		PS417_24320	0.26	-1.6
5,279,401	-		PS417_24320	0.42	-0.7
5,279,696	+				+1.7
5,280,480	+				-0.2
5,280,523	+				-0.6
5,280,523	+				-0.3
5,280,523	+				-1.6
5,280,524	-				+1.6
5,280,524	-				+1.2
5,280,524	-				-1.6
5,280,563	+				+0.6
5,280,567	+				-1.6
5,280,568	-				+0.1
5,280,568	-				+1.3
5,280,570	+				-0.1
5,280,627	-				-0.2
5,280,637	+				-2.1
5,280,638	-				-2.1