Strain Fitness in Pseudomonas simiae WCS417 around PS417_23930

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
5,179,182	+		PS417_23925	0.51	-0.6
5,179,369	-		PS417_23925	0.61	-0.4
5,179,507	+		PS417_23925	0.68	-1.2
5,179,608	+		PS417_23925	0.73	+1.1
5,179,608	+		PS417_23925	0.73	-1.0
5,179,609	-		PS417_23925	0.73	+1.8
5,179,639	-		PS417_23925	0.75	+1.4
5,179,662	+		PS417_23925	0.76	-0.8
5,179,662	+		PS417_23925	0.76	+0.6
5,179,705	-		PS417_23925	0.78	-0.7
5,179,854	+		PS417_23925	0.86	-0.4
5,179,854	+		PS417_23925	0.86	-1.9
5,179,854	+		PS417_23925	0.86	-0.4
5,179,855	-		PS417_23925	0.86	-0.4
5,179,855	-		PS417_23925	0.86	+0.5
5,179,855	-		PS417_23925	0.86	+0.1
5,179,855	-		PS417_23925	0.86	-0.2
5,179,855	-		PS417_23925	0.86	-0.2
5,179,928	+		PS417_23925	0.90	-1.2
5,180,060	+				-0.7
5,180,638	+		PS417_23930	0.57	-0.2
5,180,639	-		PS417_23930	0.57	+0.7
5,180,641	+		PS417_23930	0.58	+0.4
5,180,642	-		PS417_23930	0.58	+0.5
5,180,642	-		PS417_23930	0.58	+0.6
5,180,642	-		PS417_23930	0.58	+1.6
5,180,642	-		PS417_23930	0.58	-0.2
5,180,642	-		PS417_23930	0.58	+1.3
5,180,741	+				-0.4
5,180,741	+		PS417_23930	0.69	+2.6
5,181,021	+				+0.2
5,181,021	+				-0.1
5,181,021	+				-1.4
5,181,021	+				-0.3
5,181,022	-				-0.4
5,181,022	-				-0.4
5,181,022	-				+0.6
5,181,028	+				+1.0
5,181,222	-		PS417_23935	0.15	-0.5
5,181,370	+		PS417_23935	0.30	-0.8
5,181,371	-		PS417_23935	0.30	-0.3
5,181,371	-		PS417_23935	0.30	-0.0
5,181,404	+		PS417_23935	0.33	-0.0
5,181,544	+		PS417_23935	0.47	+0.1
5,181,546	+		PS417_23935	0.47	+0.5
5,181,691	+		PS417_23935	0.61	-1.4
5,181,692	-		PS417_23935	0.61	-0.1
5,181,761	-		PS417_23935	0.68	-0.2
5,181,785	-		PS417_23935	0.71	+1.0