Strain Fitness in Pseudomonas simiae WCS417 around PS417_21835

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,740,281	+				-0.2
4,740,282	-				-0.1
4,740,282	-				+0.4
4,740,294	+				-0.1
4,740,295	-				+0.2
4,740,295	-				+0.4
4,740,326	+				+1.1
4,740,327	-				-0.1
4,740,544	+		PS417_21830	0.22	-0.9
4,740,921	+		PS417_21830	0.83	+0.2
4,740,922	-		PS417_21830	0.83	+0.2
4,741,113	-				-2.7
4,741,137	-				+0.3
4,741,146	+				-1.2
4,741,147	-				+1.4
4,741,147	-				+0.1
4,741,147	-				-0.1
4,741,195	+				-0.5
4,741,195	+				-1.3
4,741,196	-				-1.2
4,741,261	+				-1.4
4,741,261	+				+0.1
4,741,262	-				-0.9
4,741,262	-				-1.9
4,741,265	+				+0.4
4,741,265	+				+0.4
4,741,266	-				+0.0
4,741,266	-				+0.1
4,741,451	+		PS417_21835	0.22	-0.4
4,741,451	+		PS417_21835	0.22	-0.1
4,741,452	-		PS417_21835	0.22	-1.8
4,741,631	-		PS417_21835	0.39	+0.2
4,741,664	+		PS417_21835	0.42	-0.1
4,741,664	+		PS417_21835	0.42	-0.3
4,741,691	+		PS417_21835	0.45	-0.6
4,741,719	-		PS417_21835	0.48	-1.8
4,741,733	-		PS417_21835	0.49	-0.4
4,741,925	-		PS417_21835	0.67	-1.4
4,742,286	+				-0.1
4,742,287	-				+0.6
4,742,466	-				+0.1
4,742,544	+				+1.8
4,742,545	-				-0.8
4,742,569	-				+1.5
4,742,774	+		PS417_21840	0.18	+0.4
4,742,873	+		PS417_21840	0.25	+1.1
4,742,873	+		PS417_21840	0.25	+0.5
4,743,206	-		PS417_21840	0.50	-0.1
4,743,239	+		PS417_21840	0.53	+0.8
4,743,240	-		PS417_21840	0.53	-0.2
4,743,252	-		PS417_21840	0.54	+0.5