Strain Fitness in Pseudomonas simiae WCS417 around PS417_21460

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,657,576	+		PS417_21450	0.39	-1.8
4,657,880	+		PS417_21450	0.70	-1.5
4,658,947	-				+0.5
4,659,048	+				+0.8
4,659,049	-				-0.6
4,659,052	-				+0.7
4,659,052	-				-0.0
4,659,399	+		PS417_21465	0.62	-0.3
4,659,399	+		PS417_21465	0.62	-0.6
4,659,399	+		PS417_21465	0.62	-0.2
4,659,406	+		PS417_21465	0.64	-2.0
4,659,471	-		PS417_21465	0.75	-0.3
4,659,579	+				+0.5
4,659,579	+				-0.1
4,659,580	-				+1.0
4,659,589	-				+0.5
4,659,666	+				+0.7
4,659,666	+				+0.5
4,659,667	-				-0.7
4,659,667	-				+1.0
4,659,667	-				-1.3
4,659,779	+				-0.8
4,659,780	-				+0.1
4,659,780	-				-0.8
4,659,781	+				+1.3
4,659,781	+				+0.6
4,659,781	+				+0.1
4,659,781	+				+0.5
4,659,782	-				-0.5
4,659,782	-				+2.0
4,659,782	-				-0.3
4,659,782	-				-2.3
4,659,782	-				+0.5
4,659,782	-				+0.5
4,659,782	-				+0.9
4,659,782	-				+0.3