Strain Fitness in Pseudomonas simiae WCS417 around PS417_21085

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,588,579	-				+1.3
4,588,598	-				+0.9
4,589,729	-		PS417_21085	0.34	+0.3
4,589,729	-		PS417_21085	0.34	+3.0
4,589,729	-		PS417_21085	0.34	+0.4
4,589,788	-		PS417_21085	0.42	-0.1
4,589,926	-		PS417_21085	0.61	+0.5
4,590,052	-		PS417_21085	0.79	+1.3
4,590,358	+				-2.6
4,590,422	+				-2.3
4,590,423	-				-1.7
4,590,471	+				+0.6
4,590,471	+				-1.9
4,590,494	+				-0.2
4,590,551	-		PS417_21090	0.15	-1.5
4,590,566	-		PS417_21090	0.18	+0.4
4,590,800	-		PS417_21090	0.61	+2.1
4,591,071	-				-0.1
4,591,071	-				-0.3