Strain Fitness in Pseudomonas simiae WCS417 around PS417_02065

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
461,814	+		PS417_02060	0.51	+0.0
461,815	-		PS417_02060	0.51	+0.5
461,992	+		PS417_02060	0.65	+0.3
462,226	+		PS417_02060	0.84	-0.9
462,328	+				-1.4
462,328	+				-0.7
462,328	+				+0.2
462,328	+				+1.9
462,329	-				+0.7
462,329	-				-0.7
462,329	-				-0.5
462,421	+				-0.2
462,421	+				-0.4
462,466	+				-1.9
462,467	-				+0.6
462,467	-				-2.7
462,504	+				+0.8
462,562	-				-0.5
462,625	+				-1.2
463,063	+		PS417_02065	0.26	+1.4
463,063	+		PS417_02065	0.26	-1.1
463,090	-		PS417_02065	0.27	-0.0
463,710	-		PS417_02065	0.54	-2.9
463,811	+		PS417_02065	0.58	-0.1
463,812	-		PS417_02065	0.58	+3.2
463,835	-		PS417_02065	0.59	-0.0
463,879	-		PS417_02065	0.61	+1.4
463,982	-		PS417_02065	0.66	-0.0
463,982	-		PS417_02065	0.66	+0.4
464,083	+		PS417_02065	0.70	-0.3
464,084	-		PS417_02065	0.70	+0.7
464,573	-				+0.6
464,578	+				+1.8
464,610	+				+0.1
464,611	-				+1.8
464,611	-				-1.8
464,611	-				+0.8
464,611	-				-0.0
464,828	-				+0.8
464,828	-				-0.7
465,330	-		PS417_02070	0.85	+0.3
465,476	-				-2.4
465,596	+		PS417_02075	0.33	-2.1
465,597	-		PS417_02075	0.33	+1.6
465,597	-		PS417_02075	0.33	-0.1
465,734	+		PS417_02075	0.65	-1.6
465,734	+		PS417_02075	0.65	+1.9
465,734	+		PS417_02075	0.65	-0.4
465,735	-		PS417_02075	0.65	+0.6
465,735	-		PS417_02075	0.65	+0.4