Strain Fitness in Pseudomonas simiae WCS417 around PS417_19365

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,195,520	+				+1.8
4,195,584	+				+0.3
4,195,585	-				+0.2
4,195,912	-		PS417_19355	0.77	+0.7
4,195,942	+		PS417_19355	0.85	-1.0
4,195,942	+				+3.1
4,195,942	+		PS417_19355	0.85	-0.1
4,195,942	+		PS417_19355	0.85	-0.1
4,195,942	+		PS417_19355	0.85	-0.0
4,195,943	-		PS417_19355	0.86	+0.1
4,195,943	-				-0.5
4,195,943	-				-0.1
4,195,967	-				-0.2
4,196,002	+				-0.5
4,196,002	+				-0.3
4,196,020	-				-0.8
4,196,020	-				-0.5
4,196,250	+		PS417_19360	0.72	-2.6
4,196,281	+		PS417_19360	0.82	+1.7
4,196,282	-		PS417_19360	0.82	+0.1
4,196,405	-				-2.7
4,196,611	+		PS417_19365	0.21	-0.5
4,196,657	-		PS417_19365	0.24	-0.7
4,196,784	+				+1.5
4,196,840	+		PS417_19365	0.38	-0.3
4,196,841	-		PS417_19365	0.38	+0.6
4,196,865	-		PS417_19365	0.40	-1.5
4,196,865	-		PS417_19365	0.40	-1.3
4,196,868	+		PS417_19365	0.40	-0.5
4,196,868	+		PS417_19365	0.40	+0.1
4,196,868	+		PS417_19365	0.40	-0.2
4,196,868	+		PS417_19365	0.40	-1.5
4,196,869	-				-0.5
4,196,869	-		PS417_19365	0.40	-0.5
4,196,926	-		PS417_19365	0.45	-0.9
4,197,352	-		PS417_19365	0.77	-2.3
4,197,352	-		PS417_19365	0.77	+0.9
4,197,352	-		PS417_19365	0.77	-0.5
4,197,356	-		PS417_19365	0.77	-0.5
4,197,402	+		PS417_19365	0.80	-0.1
4,197,402	+		PS417_19365	0.80	-0.8
4,197,913	-		PS417_19370	0.19	+1.1
4,198,152	+		PS417_19370	0.38	-1.2
4,198,289	-		PS417_19370	0.48	+0.6
4,198,550	-		PS417_19370	0.69	-0.4
4,198,569	+		PS417_19370	0.70	-0.5
4,198,570	-		PS417_19370	0.70	+0.2