Strain Fitness in Pseudomonas simiae WCS417 around PS417_19035

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,118,843	+		PS417_19030	0.54	-0.4
4,118,843	+		PS417_19030	0.54	-0.7
4,118,844	-		PS417_19030	0.55	+0.5
4,118,844	-		PS417_19030	0.55	-2.6
4,118,866	-				+1.5
4,119,011	+		PS417_19030	0.68	+0.4
4,119,012	-		PS417_19030	0.68	+0.5
4,119,464	+				+1.5
4,119,926	+				+1.5
4,119,929	+				+0.5
4,119,930	-				+0.9
4,120,003	+				-1.8
4,120,004	-				+0.3
4,120,007	+				-0.8
4,120,065	-				-0.5
4,120,065	-				-0.4
4,120,093	-				+0.9
4,120,185	+				+1.0
4,120,299	-		PS417_19040	0.17	-0.7
4,120,439	+		PS417_19040	0.27	-2.1
4,120,440	-		PS417_19040	0.27	+1.2
4,120,440	-		PS417_19040	0.27	-0.8
4,120,641	+		PS417_19040	0.41	-1.4
4,120,641	+		PS417_19040	0.41	-1.0
4,120,648	+		PS417_19040	0.41	-2.3
4,120,649	-		PS417_19040	0.41	-1.3