Strain Fitness in Pseudomonas simiae WCS417 around PS417_19020

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,115,262	-		PS417_19015	0.11	-1.5
4,115,262	-		PS417_19015	0.11	-0.7
4,115,262	-		PS417_19015	0.11	-0.2
4,115,348	+		PS417_19015	0.21	-1.3
4,115,348	+		PS417_19015	0.21	+0.7
4,115,454	-		PS417_19015	0.32	-0.4
4,115,498	+		PS417_19015	0.37	+0.9
4,115,612	+		PS417_19015	0.50	+0.5
4,115,613	-		PS417_19015	0.50	-0.1
4,115,712	-		PS417_19015	0.61	-0.2
4,115,825	-		PS417_19015	0.74	+0.4
4,115,825	-		PS417_19015	0.74	-2.6
4,116,069	+				+1.1
4,116,135	-				-1.3
4,116,135	-				+1.0
4,116,394	+		PS417_19020	0.32	-0.1
4,116,428	+		PS417_19020	0.37	+1.6
4,116,429	-		PS417_19020	0.37	-0.3
4,116,429	-				+0.5
4,116,601	+		PS417_19020	0.63	+1.5
4,116,728	+		PS417_19020	0.82	+0.8
4,117,038	+		PS417_19025	0.16	-0.9
4,117,038	+		PS417_19025	0.16	-1.4
4,117,114	-				+0.8
4,117,161	+		PS417_19025	0.26	+0.9
4,117,161	+		PS417_19025	0.26	-1.7
4,117,161	+		PS417_19025	0.26	-0.2
4,117,162	-		PS417_19025	0.26	+0.7
4,117,162	-		PS417_19025	0.26	-0.3
4,117,162	-		PS417_19025	0.26	-0.1
4,117,162	-		PS417_19025	0.26	+0.3
4,117,162	-		PS417_19025	0.26	-0.9
4,117,390	-				-0.3
4,117,426	+		PS417_19025	0.48	-0.1
4,117,427	-		PS417_19025	0.48	-0.1
4,117,467	+				-0.8
4,117,569	+		PS417_19025	0.60	-0.2
4,117,655	+		PS417_19025	0.67	+0.2
4,117,655	+		PS417_19025	0.67	-0.3
4,117,701	-		PS417_19025	0.71	-1.9
4,117,741	-		PS417_19025	0.74	-1.0
4,117,821	+		PS417_19025	0.81	+0.5
4,117,821	+		PS417_19025	0.81	-0.4
4,117,822	-		PS417_19025	0.81	-0.3
4,117,822	-		PS417_19025	0.81	+0.8
4,117,822	-		PS417_19025	0.81	+0.8
4,117,822	-		PS417_19025	0.81	+0.2