Strain Fitness in Pseudomonas simiae WCS417 around PS417_18905

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,093,530	-		PS417_18900	0.21	+0.6
4,093,637	+		PS417_18900	0.33	+0.1
4,093,709	+		PS417_18900	0.41	+0.2
4,093,710	-		PS417_18900	0.41	+0.3
4,093,781	+		PS417_18900	0.48	-0.4
4,093,832	+		PS417_18900	0.54	+0.3
4,093,832	+		PS417_18900	0.54	-1.5
4,093,832	+		PS417_18900	0.54	-0.4
4,093,832	+		PS417_18900	0.54	-0.5
4,093,833	-		PS417_18900	0.54	+0.4
4,093,960	+		PS417_18900	0.68	-0.7
4,094,301	+				-0.2
4,094,301	+				+0.3
4,094,302	-				+3.1
4,094,386	+				-0.3
4,094,435	+				-0.1
4,094,436	-				+0.5
4,094,996	+		PS417_18905	0.40	-0.4
4,095,172	-		PS417_18905	0.54	-0.1
4,095,441	+		PS417_18905	0.76	-1.0
4,095,441	+				+0.5
4,095,441	+				+0.5
4,095,656	+				+1.1
4,095,735	+				+0.7
4,095,735	+				+1.2
4,095,735	+				-0.1
4,095,736	-				+1.1
4,095,736	-				-2.6
4,095,874	+				+1.2
4,095,874	+				-1.7
4,095,899	+				-0.2
4,095,899	+				+0.0
4,095,901	+				+0.1
4,095,902	-				-0.7
4,095,902	-				-2.8
4,095,902	-				-0.3
4,095,906	+				+4.5
4,095,906	+				+0.9
4,095,982	+				-0.3
4,096,494	+		PS417_18910	0.51	-0.0
4,096,494	+		PS417_18910	0.51	-2.5
4,096,671	+		PS417_18910	0.66	+0.3