Strain Fitness in Pseudomonas simiae WCS417 around PS417_18255

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,976,739	-		PS417_18250	0.31	-0.1
3,976,903	+		PS417_18250	0.44	-2.2
3,976,904	-		PS417_18250	0.44	-1.1
3,977,259	-		PS417_18250	0.72	+0.5
3,977,272	-		PS417_18250	0.73	-1.3
3,977,668	+				-1.1
3,977,677	+				-0.2
3,977,678	-				-0.8
3,977,689	-				-3.1
3,978,019	-		PS417_18255	0.20	+0.1
3,978,272	+		PS417_18255	0.35	-1.2
3,978,272	+		PS417_18255	0.35	-1.1
3,978,342	+		PS417_18255	0.39	-0.4
3,978,344	+		PS417_18255	0.40	-0.1
3,978,344	+		PS417_18255	0.40	-1.3
3,978,344	+		PS417_18255	0.40	+0.8
3,978,345	-		PS417_18255	0.40	-3.0
3,978,411	+		PS417_18255	0.44	-1.7
3,978,420	+		PS417_18255	0.44	-1.3
3,978,421	-		PS417_18255	0.44	+0.1
3,978,424	-		PS417_18255	0.44	-0.0
3,978,516	+		PS417_18255	0.50	+0.4
3,978,517	-		PS417_18255	0.50	-1.5
3,978,517	-		PS417_18255	0.50	+0.2
3,979,010	+		PS417_18255	0.80	+0.8
3,979,011	-		PS417_18255	0.80	-0.2
3,979,507	+		PS417_18260	0.22	+0.6
3,979,518	-		PS417_18260	0.24	-0.5
3,979,518	-		PS417_18260	0.24	-1.0
3,979,562	-		PS417_18260	0.31	+0.2
3,979,734	-		PS417_18260	0.61	+1.5
3,979,766	+				+2.1
3,979,767	-		PS417_18260	0.67	-0.4
3,979,787	+		PS417_18260	0.70	-1.1
3,979,963	+				+3.4
3,980,093	+		PS417_18265	0.17	-0.7
3,980,137	-		PS417_18265	0.26	+0.5
3,980,137	-		PS417_18265	0.26	-0.1
3,980,137	-		PS417_18265	0.26	-0.5