Strain Fitness in Pseudomonas simiae WCS417 around PS417_17335

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,787,455	+		PS417_17330	0.36	+0.5
3,787,891	+		PS417_17330	0.71	+0.8
3,787,974	+		PS417_17330	0.77	-1.0
3,787,989	-		PS417_17330	0.78	-0.2
3,788,109	-		PS417_17330	0.88	+0.7
3,788,263	-				-0.6
3,788,323	+				+0.0
3,788,323	+				-0.1
3,788,323	+				+0.9
3,788,431	+				-0.6
3,788,507	+		PS417_17335	0.20	+0.6
3,788,508	-		PS417_17335	0.20	-0.3
3,788,534	+		PS417_17335	0.24	-1.7
3,788,534	+		PS417_17335	0.24	-1.6
3,788,534	+		PS417_17335	0.24	-1.6
3,788,535	-		PS417_17335	0.24	-0.6
3,788,736	-		PS417_17335	0.57	-0.1
3,788,828	+		PS417_17335	0.72	-2.3
3,788,852	+		PS417_17335	0.76	-0.1
3,788,852	+		PS417_17335	0.76	+1.0
3,788,852	+		PS417_17335	0.76	+0.0
3,788,852	+		PS417_17335	0.76	-1.2
3,788,852	+		PS417_17335	0.76	-2.0
3,788,853	-		PS417_17335	0.76	-1.2
3,788,853	-				+0.6
3,788,918	+				-0.6
3,788,919	-		PS417_17335	0.86	+0.1
3,789,152	+				-0.5
3,789,280	-		PS417_17340	0.28	+0.5
3,789,280	-		PS417_17340	0.28	+0.5
3,789,280	-		PS417_17340	0.28	+0.2
3,789,312	+		PS417_17340	0.35	-0.6
3,789,312	+		PS417_17340	0.35	-0.4
3,789,312	+				-0.6
3,789,495	+				-0.6
3,789,495	+		PS417_17340	0.74	-0.0
3,789,600	-				+1.9
3,789,600	-				-2.6
3,789,779	-		PS417_17345	0.47	+0.1
3,789,862	-		PS417_17345	0.69	+0.2
3,789,896	+		PS417_17345	0.79	-2.1
3,789,897	-		PS417_17345	0.79	+0.8
3,789,897	-		PS417_17345	0.79	+0.1
3,789,897	-		PS417_17345	0.79	+1.4
3,789,950	+				+0.3
3,789,950	+				+0.1