Strain Fitness in Pseudomonas simiae WCS417 around PS417_17085

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,730,651	+				-1.7
3,730,685	-				-1.2
3,730,698	-				+0.4
3,730,699	+				+0.1
3,730,699	+				+0.6
3,730,700	-				-1.2
3,730,700	-				-1.3
3,730,823	-		PS417_17080	0.21	-1.4
3,730,899	+		PS417_17080	0.29	-0.0
3,730,899	+		PS417_17080	0.29	-1.8
3,730,899	+		PS417_17080	0.29	+0.8
3,730,899	+		PS417_17080	0.29	-0.3
3,731,082	+				+1.4
3,731,083	-		PS417_17080	0.48	+0.2
3,731,152	+		PS417_17080	0.55	-0.8
3,731,152	+		PS417_17080	0.55	+0.4
3,731,153	-		PS417_17080	0.55	+0.2
3,731,153	-		PS417_17080	0.55	+0.7
3,731,153	-		PS417_17080	0.55	-0.4
3,731,166	+		PS417_17080	0.56	+0.4
3,731,183	+		PS417_17080	0.58	+0.8
3,731,183	+		PS417_17080	0.58	+0.5
3,731,184	-		PS417_17080	0.58	-0.5
3,731,195	-		PS417_17080	0.59	+0.1
3,731,307	-		PS417_17080	0.70	-0.4
3,731,322	-		PS417_17080	0.72	-0.2
3,731,322	-		PS417_17080	0.72	-1.4
3,731,322	-		PS417_17080	0.72	-0.3
3,731,383	+		PS417_17080	0.78	+0.3
3,731,384	-		PS417_17080	0.78	-0.2
3,732,058	+		PS417_17085	0.20	-0.2
3,732,059	-		PS417_17085	0.20	+1.3
3,732,059	-				-1.9
3,732,059	-		PS417_17085	0.20	-0.1
3,732,265	-		PS417_17085	0.29	+1.9
3,732,300	+		PS417_17085	0.30	+0.4
3,732,300	+		PS417_17085	0.30	-0.3
3,732,300	+		PS417_17085	0.30	-1.6
3,732,301	-		PS417_17085	0.30	+0.2
3,732,530	+		PS417_17085	0.40	-1.2
3,732,603	+		PS417_17085	0.43	+0.3
3,732,633	+		PS417_17085	0.44	-0.5
3,732,687	+		PS417_17085	0.47	+0.1
3,732,688	-		PS417_17085	0.47	+1.8
3,732,916	-		PS417_17085	0.56	+1.0
3,732,987	+		PS417_17085	0.59	+1.0
3,732,988	-		PS417_17085	0.59	+1.4
3,732,988	-		PS417_17085	0.59	+0.2
3,733,297	-		PS417_17085	0.72	+0.1
3,733,297	-		PS417_17085	0.72	+0.3
3,733,366	+		PS417_17085	0.75	+0.5
3,733,366	+		PS417_17085	0.75	+1.6
3,733,367	-		PS417_17085	0.75	+0.4
3,733,367	-		PS417_17085	0.75	+5.1
3,733,412	-		PS417_17085	0.77	+0.2
3,733,445	+		PS417_17085	0.79	-0.7
3,733,497	+		PS417_17085	0.81	-0.2
3,733,498	-		PS417_17085	0.81	-0.2
3,733,506	+		PS417_17085	0.81	-0.2
3,733,506	+		PS417_17085	0.81	-0.3
3,733,506	+				+0.4
3,733,506	+		PS417_17085	0.81	+0.7
3,733,506	+		PS417_17085	0.81	+0.5
3,733,731	+				-0.9
3,733,731	+				-0.2
3,733,732	-				+0.4
3,733,732	-				+0.1
3,733,732	-				-0.9
3,733,989	-				-0.7
3,734,140	+				+0.4
3,734,232	+		PS417_17090	0.27	+0.6
3,734,232	+		PS417_17090	0.27	+1.1
3,734,232	+		PS417_17090	0.27	-1.2
3,734,242	+		PS417_17090	0.28	-0.8
3,734,775	-				+0.2
3,734,825	+				-0.1
3,734,826	-				+0.7
3,734,870	+				-0.4
3,734,870	+				+0.3
3,734,871	-				-0.2
3,734,871	-				-0.6
3,734,871	-				-1.4
3,734,871	-				-0.9
3,734,871	-				+0.4
3,734,871	-				+0.1
3,734,912	+		PS417_17095	0.16	+0.2
3,734,913	-		PS417_17095	0.16	+0.4
3,734,931	+		PS417_17095	0.19	+0.4