Strain Fitness in Pseudomonas simiae WCS417 around PS417_16995

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,711,839	+		PS417_16990	0.36	-1.1
3,711,840	-		PS417_16990	0.36	+0.6
3,712,396	+		PS417_16990	0.81	-0.2
3,712,396	+		PS417_16990	0.81	-0.2
3,712,494	+		PS417_16990	0.89	+0.5
3,712,494	+		PS417_16990	0.89	-1.0
3,712,561	+				+0.3
3,712,561	+				+0.7
3,712,562	-				-0.2
3,712,657	+				-0.6
3,712,658	-				+1.2
3,712,677	-				+0.2
3,712,691	-				-1.4
3,712,718	-				+0.7
3,712,721	-				-1.4
3,712,760	-				-0.3
3,712,831	+				-0.5
3,712,832	-				-0.4
3,713,377	-		PS417_16995	0.64	+2.4
3,713,377	-		PS417_16995	0.64	-0.3
3,713,467	+		PS417_16995	0.73	-1.9
3,713,468	-		PS417_16995	0.74	-3.8
3,713,599	+		PS417_16995	0.88	-0.2
3,713,600	-		PS417_16995	0.88	-0.6
3,713,600	-		PS417_16995	0.88	-1.0
3,713,713	+				+0.1
3,713,805	-				-1.2
3,713,808	+				-1.2
3,713,808	+				-1.2
3,713,809	-				+3.4
3,713,865	+		PS417_17000	0.18	-0.9
3,713,916	+		PS417_17000	0.31	-2.2