Strain Fitness in Pseudomonas simiae WCS417 around PS417_16830

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,669,801	+		PS417_16825	0.35	-1.4
3,669,802	-		PS417_16825	0.35	-0.4
3,669,802	-		PS417_16825	0.35	+1.0
3,669,802	-		PS417_16825	0.35	+0.7
3,669,802	-		PS417_16825	0.35	-0.9
3,669,838	+		PS417_16825	0.39	-0.2
3,670,505	+				-2.1
3,670,579	-				+0.2
3,670,605	+				+0.0
3,670,605	+				-0.8
3,670,613	+				+0.3
3,670,613	+				-0.8
3,670,625	-				+1.7
3,670,688	+				-0.8
3,670,733	+				+0.4
3,670,896	+				+1.8
3,670,906	-				+3.0
3,670,908	+		PS417_16830	0.10	+0.8
3,670,908	+		PS417_16830	0.10	+1.2
3,670,908	+		PS417_16830	0.10	-2.3
3,670,909	-		PS417_16830	0.10	+0.7
3,670,909	-		PS417_16830	0.10	+0.3
3,670,909	-		PS417_16830	0.10	+0.4
3,670,909	-		PS417_16830	0.10	+0.3
3,670,909	-		PS417_16830	0.10	-0.4
3,671,095	-		PS417_16830	0.16	-1.1
3,671,095	-		PS417_16830	0.16	-2.6
3,671,095	-		PS417_16830	0.16	+0.6
3,671,175	+		PS417_16830	0.19	-0.6
3,671,176	-		PS417_16830	0.19	+0.1
3,671,341	-		PS417_16830	0.25	+2.4
3,671,813	+		PS417_16830	0.41	+0.2
3,671,886	+		PS417_16830	0.44	+0.8
3,672,172	-		PS417_16830	0.53	+1.2
3,672,765	+		PS417_16830	0.74	+1.4
3,672,934	-				+0.8
3,673,197	-		PS417_16830	0.88	+0.5
3,673,206	+		PS417_16830	0.89	+1.4
3,673,206	+				+1.1
3,673,206	+		PS417_16830	0.89	-2.7
3,673,207	-		PS417_16830	0.89	-0.2
3,673,429	+				+0.4
3,673,485	-				-0.6
3,673,508	-				-1.9
3,673,736	+		PS417_16835	0.58	-0.1
3,673,737	-		PS417_16835	0.59	-0.2
3,674,032	+				-1.3
3,674,072	-		PS417_16840	0.12	+0.5
3,674,251	+		PS417_16840	0.22	+0.4
3,674,252	-		PS417_16840	0.22	+0.4
3,674,320	+		PS417_16840	0.26	-0.5
3,674,321	-		PS417_16840	0.26	-0.3
3,674,374	+		PS417_16840	0.30	-2.1
3,674,375	-		PS417_16840	0.30	-1.7
3,674,375	-		PS417_16840	0.30	+0.3
3,674,432	-		PS417_16840	0.33	+0.3