Strain Fitness in Pseudomonas simiae WCS417 around PS417_16770

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,657,569	+		PS417_16765	0.47	+0.1
3,657,695	-		PS417_16765	0.57	+0.4
3,657,722	-		PS417_16765	0.59	+0.6
3,658,046	+		PS417_16765	0.85	-0.4
3,658,047	-		PS417_16765	0.85	+0.1
3,658,047	-		PS417_16765	0.85	-0.1
3,658,047	-		PS417_16765	0.85	+0.4
3,658,226	+				+0.8
3,658,226	+				+0.6
3,658,227	-				+0.3
3,658,227	-				+0.7
3,658,346	+				-1.0
3,658,347	-				-0.8
3,658,347	-				+1.9
3,658,347	-				-1.2
3,658,418	+				-1.1
3,658,418	+				-0.2
3,658,419	-				+0.6
3,658,502	+				+1.4
3,658,503	-				+1.1
3,659,221	+		PS417_16770	0.55	-0.7
3,659,517	+		PS417_16770	0.76	-0.5
3,659,604	+		PS417_16770	0.82	-1.2
3,659,703	+		PS417_16770	0.89	-1.0
3,659,703	+		PS417_16770	0.89	+0.6
3,659,703	+		PS417_16770	0.89	+0.3
3,659,823	-				+1.4
3,659,865	+				-0.4
3,659,881	-				+0.8
3,659,954	+		PS417_16775	0.12	+0.2
3,659,955	-		PS417_16775	0.12	-1.2
3,659,973	+		PS417_16775	0.14	-2.7
3,659,974	-				+2.0
3,659,974	-		PS417_16775	0.14	+0.4
3,660,073	+		PS417_16775	0.27	+0.1
3,660,518	-		PS417_16775	0.85	-2.6
3,660,656	-				-0.6