Strain Fitness in Pseudomonas simiae WCS417 around PS417_16265

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,564,507	+		PS417_16260	0.66	+0.6
3,564,507	+		PS417_16260	0.66	+0.1
3,564,624	+		PS417_16260	0.72	+0.2
3,564,624	+		PS417_16260	0.72	-0.5
3,564,624	+		PS417_16260	0.72	-0.3
3,564,625	-		PS417_16260	0.72	-2.8
3,564,625	-		PS417_16260	0.72	+0.8
3,564,628	-		PS417_16260	0.72	+0.1
3,564,628	-		PS417_16260	0.72	+0.5
3,564,696	+		PS417_16260	0.75	+2.0
3,564,723	+		PS417_16260	0.77	-0.1
3,564,741	+		PS417_16260	0.78	+2.0
3,564,741	+		PS417_16260	0.78	-0.5
3,564,741	+		PS417_16260	0.78	+0.1
3,564,742	-		PS417_16260	0.78	-0.2
3,564,979	-		PS417_16260	0.89	+1.7
3,565,001	+		PS417_16260	0.90	+0.2
3,565,001	+		PS417_16260	0.90	+0.2
3,565,053	+				+0.3
3,565,053	+				-0.4
3,565,054	-				-1.2
3,565,285	+				-0.5
3,565,286	-				+0.1
3,565,286	-				-0.1
3,565,286	-				-1.8
3,565,481	+		PS417_16265	0.26	-2.0
3,565,597	-		PS417_16265	0.69	+0.4
3,565,627	-		PS417_16265	0.80	+0.8
3,565,640	-		PS417_16265	0.85	+1.0
3,565,654	-				-2.4
3,565,684	-				+1.3
3,565,695	-				-0.5
3,565,695	-				+1.7
3,565,715	+				-0.1
3,565,715	+				-1.9
3,565,716	-				-0.5
3,565,757	-				-0.7
3,565,790	+				-0.1
3,565,791	-				-0.2
3,565,796	+				+1.0
3,565,797	-				+0.5
3,565,797	-				-0.7
3,565,816	+				+2.3
3,565,817	-				-1.5
3,565,858	+				-1.8
3,565,859	-				-1.7
3,565,859	-				+0.7
3,565,859	-				-2.2
3,565,859	-				-1.0
3,566,095	+		PS417_16270	0.37	+2.3
3,566,096	-				-0.2
3,566,146	+		PS417_16270	0.44	-0.4
3,566,147	-		PS417_16270	0.44	+0.3
3,566,194	+		PS417_16270	0.51	-0.8
3,566,195	-		PS417_16270	0.51	+0.3
3,566,332	+		PS417_16270	0.69	-1.1
3,566,350	-		PS417_16270	0.71	-0.5
3,566,353	+		PS417_16270	0.72	+1.3
3,566,497	-				-0.2
3,566,622	-				-0.5