Strain Fitness in Pseudomonas simiae WCS417 around PS417_15985

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,502,517	+		PS417_15980	0.34	-0.3
3,502,518	-				+0.3
3,502,518	-		PS417_15980	0.34	+0.8
3,502,687	-		PS417_15980	0.50	-0.2
3,502,770	-		PS417_15980	0.58	-0.1
3,502,987	+		PS417_15980	0.78	-3.4
3,502,988	-		PS417_15980	0.79	-2.0
3,502,988	-		PS417_15980	0.79	-0.3
3,502,988	-		PS417_15980	0.79	-0.5
3,503,112	-				+0.4
3,503,169	-				+0.4
3,503,169	-				+0.2
3,503,169	-				+0.6
3,503,169	-				+0.3
3,503,169	-				-2.4
3,503,249	+				-0.5
3,503,417	-		PS417_15985	0.19	-0.3
3,503,417	-		PS417_15985	0.19	-1.9
3,503,422	+		PS417_15985	0.20	-3.7
3,503,653	+		PS417_15985	0.57	-0.9
3,503,654	-		PS417_15985	0.57	-0.6
3,503,672	-		PS417_15985	0.60	-0.8
3,503,672	-		PS417_15985	0.60	-0.4
3,503,672	-		PS417_15985	0.60	-0.1
3,503,767	+		PS417_15985	0.75	+0.2
3,503,894	-				-1.0
3,504,000	-				+0.3
3,504,076	+				+0.9
3,504,077	-				-0.8
3,504,599	-		PS417_15990	0.39	-0.3
3,504,599	-				-0.3
3,504,599	-		PS417_15990	0.39	+1.6
3,504,669	+		PS417_15990	0.44	-1.5
3,504,793	-				+1.3