Strain Fitness in Pseudomonas simiae WCS417 around PS417_15935

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,486,253	+		PS417_15930	0.41	+1.2
3,486,254	-		PS417_15930	0.41	+1.5
3,486,268	+		PS417_15930	0.43	+0.5
3,486,269	-		PS417_15930	0.43	+1.5
3,486,340	+		PS417_15930	0.51	-0.3
3,486,737	+				-2.2
3,486,764	+				-1.0
3,486,855	-				+0.0
3,487,069	+		PS417_15935	0.35	+0.0
3,487,070	-				-1.7
3,487,073	+		PS417_15935	0.36	+1.9
3,487,074	-				-0.7
3,487,149	+		PS417_15935	0.53	-0.7
3,487,360	-				-0.0
3,487,360	-				+0.7
3,487,534	-		PS417_15940	0.12	-2.2
3,487,534	-		PS417_15940	0.12	+0.5
3,487,690	+		PS417_15940	0.23	+2.0
3,487,691	-		PS417_15940	0.23	+0.3
3,487,691	-		PS417_15940	0.23	-0.9
3,487,921	-		PS417_15940	0.39	-1.0
3,487,961	+		PS417_15940	0.42	+0.1