Strain Fitness in Pseudomonas simiae WCS417 around PS417_15905

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,482,524	-				+0.6
3,482,598	+		PS417_15900	0.70	-1.0
3,482,626	-		PS417_15900	0.72	+0.5
3,482,634	+		PS417_15900	0.72	-0.3
3,482,634	+		PS417_15900	0.72	-1.7
3,482,647	-				-2.0
3,482,710	-		PS417_15900	0.75	-0.5
3,482,710	-		PS417_15900	0.75	-0.3
3,482,923	-		PS417_15900	0.84	+0.5
3,482,959	-		PS417_15900	0.85	+0.1
3,482,959	-		PS417_15900	0.85	+0.8
3,483,157	-				-0.1
3,483,157	-				+0.5
3,483,157	-				+0.6
3,483,157	-				-0.1
3,483,157	-				-0.7
3,483,159	+				+0.2
3,483,159	+				-0.8
3,483,498	+		PS417_15905	0.12	-0.3
3,483,498	+		PS417_15905	0.12	-0.3
3,483,499	-		PS417_15905	0.12	+0.2
3,483,499	-		PS417_15905	0.12	+1.3
3,483,499	-		PS417_15905	0.12	-0.2
3,483,499	-		PS417_15905	0.12	-1.1
3,483,499	-		PS417_15905	0.12	-0.9
3,483,501	-		PS417_15905	0.12	-2.0
3,483,555	+		PS417_15905	0.18	-2.3
3,483,556	-		PS417_15905	0.19	-0.6
3,483,564	+		PS417_15905	0.19	-0.2
3,483,625	+		PS417_15905	0.26	-0.4
3,483,626	-		PS417_15905	0.26	-2.7
3,483,663	+		PS417_15905	0.31	-0.2
3,483,861	+		PS417_15905	0.53	-0.8
3,483,862	-				+0.3
3,483,945	+		PS417_15905	0.62	+0.2
3,483,986	+		PS417_15905	0.67	+0.3
3,483,986	+		PS417_15905	0.67	-1.7
3,483,986	+				+0.7
3,484,237	+				-0.8
3,484,237	+				+0.4
3,484,238	-				-0.1
3,484,238	-				-0.2
3,484,238	-				+0.2
3,484,238	-				+0.1
3,484,241	+				-0.7
3,484,565	+		PS417_15910	0.58	-0.5
3,484,566	-		PS417_15910	0.58	-1.4
3,484,664	-		PS417_15910	0.75	-0.2
3,484,664	-		PS417_15910	0.75	+0.3
3,484,926	+				+1.7
3,484,926	+				-0.4
3,484,926	+				-0.3
3,485,107	+		PS417_15915	0.60	-3.6
3,485,108	-		PS417_15915	0.60	+0.3