Strain Fitness in Pseudomonas simiae WCS417 around PS417_15635

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,429,739	-				-0.4
3,429,739	-				-0.7
3,429,776	+				-1.0
3,429,840	+				+0.8
3,430,105	+		PS417_15630	0.23	+0.6
3,430,172	+		PS417_15630	0.31	-0.3
3,430,234	+		PS417_15630	0.39	+1.3
3,430,354	+		PS417_15630	0.54	+1.6
3,430,354	+		PS417_15630	0.54	+0.0
3,430,354	+		PS417_15630	0.54	+0.0
3,430,355	-		PS417_15630	0.54	+3.3
3,430,400	+		PS417_15630	0.60	-0.7
3,430,453	+		PS417_15630	0.67	-1.3
3,430,507	+		PS417_15630	0.74	+1.1
3,430,668	+				-0.3
3,430,678	+				-0.1
3,430,769	+		PS417_15635	0.12	-0.3
3,430,776	-		PS417_15635	0.13	+0.4
3,430,847	-		PS417_15635	0.23	-0.3
3,431,022	-		PS417_15635	0.47	+0.8
3,431,089	-		PS417_15635	0.56	-1.6
3,431,254	+		PS417_15635	0.78	-0.8
3,431,254	+		PS417_15635	0.78	-2.4
3,431,255	-		PS417_15635	0.78	-1.5
3,431,613	+		PS417_15640	0.47	+0.6
3,431,613	+		PS417_15640	0.47	-0.2
3,431,614	-		PS417_15640	0.47	-0.2
3,432,128	+				+1.3
3,432,129	-				-0.2
3,432,129	-				-0.6
3,432,272	-				-0.6