Strain Fitness in Pseudomonas simiae WCS417 around PS417_15555

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,405,243	+				+0.7
3,405,244	-		PS417_15550	0.52	+2.7
3,405,763	-		PS417_15550	0.89	+0.8
3,405,763	-		PS417_15550	0.89	-0.7
3,405,765	+		PS417_15550	0.89	+0.1
3,405,765	+		PS417_15550	0.89	+1.2
3,405,765	+		PS417_15550	0.89	-0.4
3,405,765	+		PS417_15550	0.89	-0.5
3,405,766	-		PS417_15550	0.89	-0.6
3,405,962	+				+0.8
3,406,036	-				-0.7
3,406,083	+				-1.7
3,406,083	+				+0.1
3,406,299	+				-0.3
3,406,393	+		PS417_15555	0.13	+0.0
3,406,501	-		PS417_15555	0.21	-0.3
3,406,503	+		PS417_15555	0.21	-0.6
3,406,595	+		PS417_15555	0.28	+0.6
3,407,197	-		PS417_15555	0.72	-0.3
3,407,271	+		PS417_15555	0.77	-0.4
3,407,271	+		PS417_15555	0.77	-0.7
3,407,272	-		PS417_15555	0.77	-1.0
3,407,385	+		PS417_15555	0.85	-1.6
3,407,552	+				-1.0
3,407,664	+				+0.3
3,407,708	+				-1.2
3,407,708	+				-0.1
3,407,708	+				-0.1
3,407,709	-				-0.5
3,407,709	-				-0.3
3,407,870	+		PS417_15560	0.48	+0.5
3,407,870	+		PS417_15560	0.48	+0.1
3,407,871	-				-1.3
3,408,031	+				+0.3
3,408,031	+				+2.9
3,408,134	+				-2.8
3,408,134	+				+1.0
3,408,135	-				-1.6
3,408,135	-				-0.0
3,408,139	-				-0.5
3,408,183	+				-1.3
3,408,291	+				-0.4
3,408,291	+				+0.2
3,408,291	+				+1.3
3,408,292	-				-1.7
3,408,292	-				-0.3
3,408,292	-				+1.6
3,408,292	-				-0.8
3,408,292	-				+1.3
3,408,292	-				+1.3