Strain Fitness in Pseudomonas simiae WCS417 around PS417_15460

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,386,149	+				+0.5
3,386,149	+				-3.1
3,386,262	+		PS417_15455	0.11	-0.5
3,386,405	-		PS417_15455	0.26	-0.0
3,386,405	-		PS417_15455	0.26	-1.3
3,386,584	+		PS417_15455	0.43	+0.4
3,386,584	+		PS417_15455	0.43	-1.7
3,386,584	+		PS417_15455	0.43	-0.3
3,386,585	-		PS417_15455	0.43	+0.5
3,386,701	+		PS417_15455	0.55	+0.4
3,386,702	-		PS417_15455	0.55	-0.3
3,386,771	+		PS417_15455	0.62	+2.8
3,386,772	-		PS417_15455	0.62	-3.0
3,386,860	+		PS417_15455	0.71	-0.3
3,387,259	+		PS417_15460	0.12	+0.6
3,387,612	+		PS417_15460	0.47	-0.7
3,387,613	-		PS417_15460	0.47	+0.6
3,387,695	+		PS417_15460	0.55	+0.1
3,387,696	-		PS417_15460	0.55	+1.8
3,387,696	-		PS417_15460	0.55	+0.9
3,387,696	-		PS417_15460	0.55	+0.7
3,388,095	+				-0.3
3,388,135	+				+1.2
3,388,136	-				+0.6
3,388,136	-				+1.2
3,388,205	+				+0.3
3,388,250	+				-0.0
3,388,301	+				-1.1
3,388,311	+				+0.6
3,388,311	+				-1.1
3,388,311	+				+0.1
3,388,358	+				+0.9
3,388,451	+				-2.0
3,388,499	+				+1.3
3,388,500	-				-0.1
3,388,500	-				-1.3
3,388,500	-				+3.1
3,388,584	-		PS417_15465	0.14	-0.3
3,388,662	-		PS417_15465	0.21	+0.3
3,388,662	-		PS417_15465	0.21	+2.1
3,389,099	+		PS417_15465	0.61	+1.3