Strain Fitness in Pseudomonas simiae WCS417 around PS417_15355

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,368,289	-		PS417_15350	0.34	-0.5
3,368,289	-		PS417_15350	0.34	+1.0
3,368,612	-		PS417_15350	0.61	-0.4
3,368,743	-		PS417_15350	0.72	+0.6
3,368,743	-		PS417_15350	0.72	-0.9
3,368,867	-		PS417_15350	0.82	-0.3
3,369,090	-				+1.3
3,369,135	+				-0.7
3,369,136	-				-0.2
3,369,137	+				+0.4
3,369,163	-				-0.7
3,369,166	+				-1.2
3,369,166	+				+2.0
3,369,167	-				-0.2
3,369,167	-				+0.2
3,369,217	+				+0.0
3,369,217	+				-0.1
3,369,309	+		PS417_15355	0.12	+0.5
3,369,351	+		PS417_15355	0.17	+3.7
3,369,352	-		PS417_15355	0.17	-1.2
3,369,405	+		PS417_15355	0.24	+2.7
3,369,405	+		PS417_15355	0.24	+1.1
3,369,405	+		PS417_15355	0.24	+0.1
3,369,405	+		PS417_15355	0.24	-0.0
3,369,576	+		PS417_15355	0.45	+2.0
3,369,655	-		PS417_15355	0.55	+0.6
3,369,655	-		PS417_15355	0.55	+0.8
3,369,886	-		PS417_15355	0.83	-2.2
3,369,908	+		PS417_15355	0.86	+1.1
3,369,915	+		PS417_15355	0.86	+1.7
3,369,915	+		PS417_15355	0.86	+0.2
3,369,916	-		PS417_15355	0.87	-1.7
3,370,277	+		PS417_15360	0.23	+0.0
3,370,360	+		PS417_15360	0.30	-0.9
3,370,360	+		PS417_15360	0.30	-0.5
3,370,553	+		PS417_15360	0.47	+2.3
3,370,557	+		PS417_15360	0.47	+0.6
3,370,557	+		PS417_15360	0.47	-0.3
3,370,558	-		PS417_15360	0.48	+0.6
3,370,558	-				+0.3
3,370,558	-		PS417_15360	0.48	-1.4
3,370,950	+		PS417_15360	0.82	-2.4
3,370,950	+		PS417_15360	0.82	+0.7
3,370,950	+		PS417_15360	0.82	+0.4
3,370,950	+		PS417_15360	0.82	-0.8
3,370,950	+		PS417_15360	0.82	-0.3
3,370,951	-		PS417_15360	0.82	+0.4
3,370,951	-		PS417_15360	0.82	-0.9
3,370,951	-		PS417_15360	0.82	+0.7
3,370,955	-		PS417_15360	0.82	+1.0