Strain Fitness in Pseudomonas simiae WCS417 around PS417_00015

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,902	+				-2.0
2,902	+				-0.6
2,902	+				-2.8
2,903	-				-1.6
2,903	-				-0.1
3,147	+		PS417_00015	0.22	-1.2
3,148	-		PS417_00015	0.22	+0.0
3,148	-		PS417_00015	0.22	+0.8
3,473	+		PS417_00015	0.51	-0.4
3,473	+		PS417_00015	0.51	-1.1
3,493	+		PS417_00015	0.53	-1.0
3,493	+		PS417_00015	0.53	-0.2
3,495	+		PS417_00015	0.53	-1.6
3,495	+		PS417_00015	0.53	+0.2
3,495	+		PS417_00015	0.53	-1.5
3,684	+		PS417_00015	0.71	+0.9
3,801	+		PS417_00015	0.81	-1.4
3,801	+		PS417_00015	0.81	-2.1
3,801	+		PS417_00015	0.81	-1.9
3,801	+		PS417_00015	0.81	+0.0
3,805	+		PS417_00015	0.82	+0.0
3,878	+		PS417_00015	0.88	-2.3
3,878	+		PS417_00015	0.88	-1.0
3,917	+				-0.8