Strain Fitness in Pseudomonas simiae WCS417 around PS417_15155

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,318,342	+				-0.5
3,318,386	-				+2.0
3,318,399	+				-2.6
3,318,399	+				+0.0
3,318,400	-				-1.6
3,318,400	-				-0.1
3,318,401	+				+1.7
3,318,435	+				+0.1
3,318,436	-				+0.9
3,318,534	+				-0.1
3,318,534	+				-1.9
3,318,651	-				-0.2
3,318,654	+				-0.6
3,318,654	+				+0.8
3,318,745	-				+1.3
3,318,749	-				+1.9
3,319,093	+		PS417_15155	0.10	-0.7
3,319,093	+		PS417_15155	0.10	-0.4
3,319,096	+		PS417_15155	0.10	+1.7
3,319,096	+		PS417_15155	0.10	-0.4
3,319,096	+		PS417_15155	0.10	+0.7
3,319,097	-		PS417_15155	0.10	+0.4
3,319,097	-		PS417_15155	0.10	+1.4
3,319,097	-		PS417_15155	0.10	+1.1
3,319,097	-		PS417_15155	0.10	+0.6
3,319,147	+		PS417_15155	0.12	-0.0
3,319,148	-		PS417_15155	0.12	+1.4
3,319,153	+		PS417_15155	0.13	+0.5
3,319,163	-		PS417_15155	0.13	+0.3
3,319,342	+		PS417_15155	0.20	+1.5
3,319,342	+		PS417_15155	0.20	-0.4
3,319,342	+		PS417_15155	0.20	+0.0
3,319,555	+		PS417_15155	0.29	-0.7
3,319,810	+		PS417_15155	0.40	+0.9
3,319,844	-		PS417_15155	0.42	+1.2
3,319,910	-		PS417_15155	0.44	+0.2
3,320,074	-		PS417_15155	0.51	+0.1
3,320,304	+		PS417_15155	0.61	+0.3
3,320,318	+		PS417_15155	0.62	-0.7
3,320,318	+		PS417_15155	0.62	+1.3
3,320,868	+		PS417_15155	0.85	+0.0
3,320,959	+		PS417_15155	0.89	+0.1
3,320,959	+		PS417_15155	0.89	+1.0
3,320,960	-		PS417_15155	0.89	+1.3
3,320,960	-		PS417_15155	0.89	+0.4
3,321,002	+				-1.2
3,321,003	-				-0.4
3,321,278	+				-0.8
3,321,373	-		PS417_15160	0.12	+0.3
3,321,373	-		PS417_15160	0.12	-1.5
3,321,565	+		PS417_15160	0.31	+0.8
3,321,566	-		PS417_15160	0.31	+0.9
3,322,054	+		PS417_15160	0.79	-0.1