Strain Fitness in Pseudomonas simiae WCS417 around PS417_14980

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,273,529	+		PS417_14970	0.76	+0.1
3,273,530	-		PS417_14970	0.76	-0.6
3,273,714	+				-0.1
3,273,893	+		PS417_14975	0.20	-0.2
3,273,908	+		PS417_14975	0.22	-0.1
3,274,097	+		PS417_14975	0.53	+1.0
3,274,223	+		PS417_14975	0.74	+0.8
3,274,223	+		PS417_14975	0.74	+1.3
3,274,416	+				-0.2
3,274,489	+				+0.2
3,274,489	+				-0.0
3,274,490	-				+0.4
3,274,879	+		PS417_14980	0.41	-1.8
3,275,539	+				+0.9
3,275,565	+				+0.5
3,275,567	+				+2.8
3,275,672	+		PS417_14985	0.31	-0.8
3,275,720	+		PS417_14985	0.41	-0.2
3,275,720	+		PS417_14985	0.41	+1.3
3,275,733	-		PS417_14985	0.44	+1.7
3,275,883	-		PS417_14985	0.76	+1.7
3,276,085	+				-1.0
3,276,086	-				-0.6
3,276,125	+				-2.2