Strain Fitness in Pseudomonas simiae WCS417 around PS417_14895

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,251,738	+				-2.4
3,252,162	+		PS417_14890	0.58	-0.5
3,252,322	+		PS417_14890	0.76	+0.0
3,252,378	+		PS417_14890	0.83	-0.5
3,252,440	-		PS417_14890	0.90	-1.5
3,253,057	-		PS417_14895	0.35	+0.7
3,253,330	-		PS417_14895	0.58	+1.3
3,253,387	-		PS417_14895	0.63	-0.4
3,253,422	+		PS417_14895	0.66	+0.3
3,253,423	-		PS417_14895	0.66	-2.2
3,253,423	-		PS417_14895	0.66	-0.5
3,253,438	+		PS417_14895	0.68	-0.4
3,253,438	+		PS417_14895	0.68	-0.2
3,253,438	+		PS417_14895	0.68	+1.5
3,253,438	+		PS417_14895	0.68	-0.5
3,253,439	-		PS417_14895	0.68	-1.7
3,253,497	+		PS417_14895	0.73	+0.5
3,253,497	+		PS417_14895	0.73	+0.1
3,253,500	+				-0.2
3,253,501	-		PS417_14895	0.73	+0.8
3,253,501	-		PS417_14895	0.73	-2.0
3,253,501	-		PS417_14895	0.73	-1.0
3,253,501	-		PS417_14895	0.73	-0.1
3,253,542	+		PS417_14895	0.77	-1.8
3,253,542	+		PS417_14895	0.77	+1.2
3,253,696	-				-2.4
3,253,696	-				+1.2
3,253,809	+				-1.0
3,253,946	-				+1.1
3,253,946	-				-0.6
3,253,946	-				+0.1
3,253,949	+				-2.2
3,253,950	-				-1.2
3,253,991	-				-0.0
3,253,991	-				+1.0
3,254,458	+		PS417_14900	0.40	-0.5
3,254,459	-		PS417_14900	0.40	-0.5
3,254,533	+		PS417_14900	0.46	-0.6
3,254,656	+		PS417_14900	0.56	-0.7
3,254,656	+		PS417_14900	0.56	-0.7
3,254,656	+		PS417_14900	0.56	-0.1
3,254,656	+		PS417_14900	0.56	+0.6
3,254,657	-		PS417_14900	0.56	-0.7
3,254,750	-		PS417_14900	0.63	-0.7