Strain Fitness in Pseudomonas simiae WCS417 around PS417_14890

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,250,932	-		PS417_14885	0.18	+0.8
3,250,932	-		PS417_14885	0.18	-1.0
3,250,982	+		PS417_14885	0.24	-0.2
3,250,991	+		PS417_14885	0.25	-0.4
3,250,992	-		PS417_14885	0.25	-0.4
3,251,008	+		PS417_14885	0.27	+1.5
3,251,008	+		PS417_14885	0.27	-0.3
3,251,134	+		PS417_14885	0.41	+0.5
3,251,454	-		PS417_14885	0.77	+0.0
3,251,496	-		PS417_14885	0.82	-0.5
3,251,529	-		PS417_14885	0.86	+0.7
3,251,537	+		PS417_14885	0.86	-0.8
3,251,537	+		PS417_14885	0.86	+0.3
3,251,538	-		PS417_14885	0.87	+0.9
3,251,538	-		PS417_14885	0.87	-0.1
3,251,539	+		PS417_14885	0.87	-0.3
3,251,540	-		PS417_14885	0.87	-0.2
3,251,543	+		PS417_14885	0.87	-0.5
3,251,544	-		PS417_14885	0.87	+0.2
3,251,544	-		PS417_14885	0.87	+0.8
3,251,544	-		PS417_14885	0.87	+1.0
3,251,588	+				+0.2
3,251,641	+				+0.8
3,251,642	-				+0.4
3,251,645	+				+0.7
3,251,645	+				-2.2
3,251,738	+				-2.4
3,252,162	+		PS417_14890	0.58	-0.5
3,252,322	+		PS417_14890	0.76	+0.0
3,252,378	+		PS417_14890	0.83	-0.5
3,252,440	-		PS417_14890	0.90	-1.5
3,253,057	-		PS417_14895	0.35	+0.7
3,253,330	-		PS417_14895	0.58	+1.3
3,253,387	-		PS417_14895	0.63	-0.4
3,253,422	+		PS417_14895	0.66	+0.3
3,253,423	-		PS417_14895	0.66	-2.2
3,253,423	-		PS417_14895	0.66	-0.5
3,253,438	+		PS417_14895	0.68	-0.4
3,253,438	+		PS417_14895	0.68	-0.2
3,253,438	+		PS417_14895	0.68	+1.5
3,253,438	+		PS417_14895	0.68	-0.5
3,253,439	-		PS417_14895	0.68	-1.7
3,253,497	+		PS417_14895	0.73	+0.5
3,253,497	+		PS417_14895	0.73	+0.1
3,253,500	+				-0.2
3,253,501	-		PS417_14895	0.73	+0.8
3,253,501	-		PS417_14895	0.73	-2.0
3,253,501	-		PS417_14895	0.73	-1.0
3,253,501	-		PS417_14895	0.73	-0.1