Strain Fitness in Pseudomonas simiae WCS417 around PS417_13955

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,064,774	+		PS417_13950	0.13	-1.2
3,064,775	-				+0.6
3,064,852	-		PS417_13950	0.21	+0.5
3,064,928	+				+0.0
3,065,204	+		PS417_13950	0.57	+0.2
3,065,205	-		PS417_13950	0.57	+1.1
3,065,553	+				-0.7
3,065,553	+				-0.7
3,065,553	+				+1.0
3,065,553	+				+0.5
3,065,554	-				+0.1
3,065,755	+				-1.8
3,065,756	-				-0.2
3,065,756	-				+0.8
3,065,862	+		PS417_13955	0.15	+1.3
3,065,959	-		PS417_13955	0.26	+1.9
3,066,126	+		PS417_13955	0.45	+0.7
3,066,127	-		PS417_13955	0.45	-0.7
3,066,228	+		PS417_13955	0.57	+0.1
3,066,234	+		PS417_13955	0.58	+1.8
3,066,234	+		PS417_13955	0.58	-0.7
3,066,235	-		PS417_13955	0.58	+0.2
3,066,235	-		PS417_13955	0.58	+1.6
3,066,343	-		PS417_13955	0.70	+2.7
3,066,367	-		PS417_13955	0.73	-0.2
3,066,387	+		PS417_13955	0.75	-0.5
3,066,469	-		PS417_13955	0.84	-1.2
3,066,645	-				-2.5
3,066,918	+				-2.1
3,066,918	+		PS417_13960	0.25	+0.5
3,066,918	+		PS417_13960	0.25	+0.7
3,066,918	+		PS417_13960	0.25	+0.2
3,066,918	+		PS417_13960	0.25	-0.2
3,066,919	-				+1.6
3,066,919	-		PS417_13960	0.25	+0.6
3,066,919	-		PS417_13960	0.25	+0.1
3,066,919	-		PS417_13960	0.25	-0.0
3,066,919	-		PS417_13960	0.25	-0.7
3,067,263	+		PS417_13960	0.55	-0.1
3,067,264	-		PS417_13960	0.55	+1.1
3,067,264	-		PS417_13960	0.55	-0.6