Strain Fitness in Pseudomonas simiae WCS417 around PS417_13860

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,044,401	+		PS417_13855	0.69	+0.8
3,044,785	+				-1.2
3,044,785	+				-0.2
3,044,786	-				+0.4
3,044,786	-				+0.1
3,045,555	+				+0.9
3,045,556	-				-0.2
3,045,756	+				+0.0
3,045,757	-				+1.3
3,045,894	-		PS417_13865	0.16	-1.5
3,045,977	+				-0.2
3,045,977	+		PS417_13865	0.25	-0.2
3,046,159	+		PS417_13865	0.46	-1.5
3,046,275	-		PS417_13865	0.59	-0.7
3,046,361	+		PS417_13865	0.68	-0.1
3,046,363	+		PS417_13865	0.68	-0.7
3,046,364	-		PS417_13865	0.68	-0.0
3,046,364	-		PS417_13865	0.68	-2.0
3,046,388	+		PS417_13865	0.71	-0.1
3,046,389	-		PS417_13865	0.71	-2.0
3,046,389	-		PS417_13865	0.71	-0.7
3,046,389	-		PS417_13865	0.71	-1.6
3,046,470	-		PS417_13865	0.80	-0.2