Strain Fitness in Pseudomonas simiae WCS417 around PS417_13635

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,999,357	-				+0.3
2,999,622	+				-0.5
2,999,622	+				-0.5
2,999,623	-				-0.6
2,999,679	+		PS417_13625	0.15	-0.4
2,999,680	-		PS417_13625	0.16	-0.8
2,999,867	+		PS417_13625	0.50	-0.8
2,999,868	-		PS417_13625	0.50	-0.2
2,999,883	+		PS417_13625	0.53	+0.5
2,999,884	-		PS417_13625	0.53	+0.6
3,000,217	+				-1.9
3,000,218	-				+0.2
3,000,894	-		PS417_13635	0.39	+1.1
3,000,894	-		PS417_13635	0.39	+1.7
3,000,963	-		PS417_13635	0.43	-0.3
3,001,043	+		PS417_13635	0.48	-0.2
3,001,043	+		PS417_13635	0.48	+1.0
3,001,065	-		PS417_13635	0.50	-0.4
3,001,067	-		PS417_13635	0.50	+0.7
3,001,771	+				-0.5
3,002,418	+		PS417_13640	0.60	+0.1
3,002,545	+		PS417_13640	0.73	-0.6
3,002,730	+				+0.1