Strain Fitness in Pseudomonas simiae WCS417 around PS417_13280

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,916,532	+		PS417_13275	0.70	-0.8
2,916,533	-		PS417_13275	0.70	-0.4
2,916,660	+		PS417_13275	0.74	-0.1
2,917,093	+		PS417_13275	0.88	+0.5
2,917,693	-				+0.4
2,918,050	+		PS417_13280	0.26	-3.1
2,918,051	-		PS417_13280	0.26	+0.3
2,918,351	-		PS417_13280	0.40	-0.1
2,918,453	-		PS417_13280	0.45	+2.3
2,918,485	+		PS417_13280	0.46	+0.2
2,918,798	-		PS417_13280	0.61	-2.8
2,918,798	-		PS417_13280	0.61	+1.1
2,918,860	+		PS417_13280	0.64	+0.2
2,918,861	-		PS417_13280	0.64	+0.9
2,918,861	-		PS417_13280	0.64	-0.6
2,918,914	+		PS417_13280	0.66	+0.6
2,918,915	-		PS417_13280	0.66	+0.6
2,918,915	-		PS417_13280	0.66	+3.0
2,918,935	+		PS417_13280	0.67	+0.2
2,918,990	-		PS417_13280	0.70	-0.8
2,919,109	+		PS417_13280	0.75	+0.7
2,919,227	-				-0.9
2,919,227	-		PS417_13280	0.81	-0.2
2,919,509	-				-1.3
2,919,621	+				+0.1
2,919,621	+				-0.3
2,919,621	+				-0.2
2,919,622	-				-1.4
2,919,622	-				+0.4
2,919,622	-				+0.4
2,919,625	+				-0.9
2,919,773	-				-0.5
2,919,835	+				-2.1
2,919,887	-				-0.5
2,919,887	-				+1.0
2,919,995	-		PS417_13285	0.11	+0.4
2,920,169	-				+0.4
2,920,458	-		PS417_13285	0.33	+0.5
2,920,458	-		PS417_13285	0.33	-1.1
2,920,458	-		PS417_13285	0.33	-2.4
2,920,507	+		PS417_13285	0.35	+1.4
2,920,507	+		PS417_13285	0.35	-0.6
2,920,508	-		PS417_13285	0.35	-0.3
2,920,598	-		PS417_13285	0.39	+1.6