Strain Fitness in Pseudomonas simiae WCS417 around PS417_13085

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,857,804	+		PS417_13080	0.19	+0.9
2,857,804	+		PS417_13080	0.19	+0.4
2,858,512	+				+0.3
2,858,513	-				-1.3
2,858,513	-				-0.6
2,858,515	+				-2.4
2,858,516	-				+0.2
2,858,571	+				-0.6
2,858,777	+		PS417_13085	0.19	-1.5
2,858,778	-		PS417_13085	0.19	-1.2
2,858,948	+		PS417_13085	0.47	+0.2
2,859,198	-		PS417_13085	0.87	-2.2
2,859,279	+				-0.3
2,859,280	-				-0.1
2,859,326	-				+2.7
2,859,362	+				-0.1
2,859,393	+				+1.0
2,859,394	-				-2.7
2,859,394	-				+0.8
2,859,394	-				-0.5
2,859,425	-				+0.2
2,859,659	+		PS417_13090	0.15	-2.6
2,859,823	+		PS417_13090	0.31	+0.0
2,859,823	+		PS417_13090	0.31	+1.3
2,859,867	-		PS417_13090	0.35	+0.0
2,859,867	-				+1.4
2,860,254	-		PS417_13090	0.72	-0.1