Strain Fitness in Pseudomonas simiae WCS417 around PS417_13020

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,843,221	+		PS417_13015	0.42	+0.1
2,843,222	-		PS417_13015	0.42	+1.5
2,843,222	-		PS417_13015	0.42	-0.2
2,843,224	+		PS417_13015	0.42	+0.5
2,843,224	+		PS417_13015	0.42	+0.2
2,843,224	+		PS417_13015	0.42	-0.8
2,843,227	+		PS417_13015	0.42	-0.7
2,843,228	-		PS417_13015	0.42	-0.4
2,843,252	-		PS417_13015	0.44	+1.4
2,843,252	-		PS417_13015	0.44	+0.4
2,843,252	-		PS417_13015	0.44	-0.4
2,843,368	+		PS417_13015	0.55	-0.3
2,843,447	-		PS417_13015	0.62	+0.2
2,843,590	+		PS417_13015	0.74	+0.6
2,843,591	-		PS417_13015	0.74	+0.3
2,843,785	+				+2.0
2,843,785	+				-0.0
2,843,786	-				-0.3
2,843,815	-				+1.1
2,844,704	+		PS417_13020	0.49	+0.1
2,844,854	+		PS417_13020	0.63	+2.6
2,844,854	+				-0.9
2,844,855	-		PS417_13020	0.63	-1.4
2,844,930	-		PS417_13020	0.70	+0.6
2,844,941	+		PS417_13020	0.71	+0.7
2,844,941	+		PS417_13020	0.71	-0.9
2,844,941	+		PS417_13020	0.71	+1.5
2,844,942	-		PS417_13020	0.71	+1.9
2,844,942	-		PS417_13020	0.71	+0.2
2,844,942	-		PS417_13020	0.71	+0.5
2,844,951	-		PS417_13020	0.72	+0.0
2,844,972	-		PS417_13020	0.74	-0.8
2,845,150	+				-1.0
2,845,175	+				-0.3
2,845,176	-				-1.6
2,845,176	-				-0.7
2,845,176	-				-0.5
2,845,866	+				+0.1
2,845,896	-				+0.6
2,845,896	-				-0.5
2,845,967	+				-0.0
2,845,974	+				-1.8