Strain Fitness in Pseudomonas simiae WCS417 around PS417_12760

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,786,558	+		PS417_12755	0.71	-1.2
2,786,559	-		PS417_12755	0.71	-1.1
2,786,736	-		PS417_12755	0.83	+0.4
2,786,863	-				-0.2
2,786,863	-				-0.0
2,787,191	-				+1.4
2,787,194	+				+0.1
2,787,214	-				+0.6
2,787,223	-				-0.3
2,787,258	+				+0.3
2,787,295	+				-0.2
2,787,296	-				+0.6
2,787,299	+				-0.5
2,787,300	-				-1.4
2,787,300	-				-0.3
2,787,350	+				-0.7
2,787,404	+				+0.5
2,787,404	+				+0.2
2,787,404	+				-0.3
2,787,405	-				-0.2
2,787,408	+				+2.4
2,787,409	-				+0.4
2,787,442	-				+0.1
2,787,644	-		PS417_12760	0.17	+0.9
2,787,650	+		PS417_12760	0.17	-0.5
2,787,650	+		PS417_12760	0.17	+0.1
2,787,789	-		PS417_12760	0.24	+1.6
2,787,851	+		PS417_12760	0.27	-0.9
2,788,511	+		PS417_12760	0.59	-0.6
2,788,512	-		PS417_12760	0.59	+0.7
2,788,640	+		PS417_12760	0.65	+0.6
2,788,640	+		PS417_12760	0.65	-2.1
2,788,641	-		PS417_12760	0.65	+0.4
2,788,725	+		PS417_12760	0.69	+0.3
2,789,085	-		PS417_12760	0.86	+1.0
2,789,288	+				-0.9
2,789,289	-				+0.6
2,789,531	+		PS417_12765	0.13	+2.0
2,789,531	+		PS417_12765	0.13	+1.0
2,789,531	+		PS417_12765	0.13	-0.6
2,789,894	+		PS417_12765	0.61	+0.5
2,789,895	-		PS417_12765	0.62	-0.2
2,790,113	-				-0.2
2,790,194	+				-0.0
2,790,195	-				+0.4
2,790,195	-				+0.7
2,790,195	-				-1.1
2,790,202	+				-0.9
2,790,203	-				+1.0
2,790,203	-				+0.5
2,790,203	-				+0.6
2,790,203	-				+0.4
2,790,221	+				-1.5
2,790,367	+		PS417_12770	0.61	+0.1
2,790,368	-		PS417_12770	0.61	+0.8