Strain Fitness in Pseudomonas simiae WCS417 around PS417_12670

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,757,437	+		PS417_12665	0.36	-0.4
2,757,910	+		PS417_12665	0.82	-0.6
2,757,911	-		PS417_12665	0.82	+0.8
2,757,973	+		PS417_12665	0.88	-1.1
2,758,045	-				+1.2
2,758,096	+				+1.5
2,758,163	-				+0.7
2,758,181	+				+0.5
2,758,232	+				+0.1
2,758,288	-				-0.8
2,758,341	-				+0.8
2,758,341	-				-0.9
2,758,356	+		PS417_12670	0.11	+0.1
2,758,591	+				+0.2
2,758,648	+				-1.1
2,759,032	+				+0.3
2,759,134	+				+1.0
2,759,134	+		PS417_12680	0.32	+0.4
2,759,135	-		PS417_12680	0.32	-0.6
2,759,135	-		PS417_12680	0.32	-0.2
2,759,294	+		PS417_12680	0.76	+0.4
2,759,315	+		PS417_12680	0.82	+0.3
2,759,315	+		PS417_12680	0.82	-0.4
2,759,316	-		PS417_12680	0.82	-0.3
2,759,316	-		PS417_12680	0.82	+1.1
2,759,341	+		PS417_12680	0.89	+0.7
2,759,342	-		PS417_12680	0.89	+0.8
2,759,342	-		PS417_12680	0.89	-0.3
2,759,402	-				+0.3
2,759,405	+				-1.0
2,759,458	-				+2.4