Strain Fitness in Pseudomonas simiae WCS417 around PS417_12105

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,626,912	-		PS417_12095	0.73	-0.2
2,626,912	-		PS417_12095	0.73	-1.2
2,626,912	-		PS417_12095	0.73	+0.8
2,626,974	+				+0.4
2,627,067	+				-1.2
2,627,068	-				-0.3
2,627,099	-				+0.1
2,627,099	-				+1.8
2,627,143	-				+0.7
2,627,185	+				+0.4
2,627,202	+				-0.9
2,627,203	-				-1.5
2,627,373	+		PS417_12100	0.27	-0.1
2,627,374	-		PS417_12100	0.27	-0.4
2,627,394	-				-0.9
2,627,424	+		PS417_12100	0.34	-0.7
2,627,424	+		PS417_12100	0.34	+1.1
2,627,425	-		PS417_12100	0.35	+0.9
2,627,505	+		PS417_12100	0.47	+2.1
2,627,505	+				+0.4
2,627,718	+		PS417_12100	0.79	+0.1
2,627,718	+		PS417_12100	0.79	+0.4
2,627,718	+		PS417_12100	0.79	+1.1
2,627,719	-		PS417_12100	0.79	+0.4
2,627,721	+		PS417_12100	0.79	-2.2
2,627,722	-		PS417_12100	0.79	-0.2
2,627,787	+		PS417_12100	0.89	+0.6
2,627,873	+				-1.4
2,627,948	+		PS417_12105	0.12	-0.9
2,627,968	+		PS417_12105	0.15	+1.0
2,628,015	-		PS417_12105	0.22	+0.4
2,628,050	+		PS417_12105	0.27	+0.4
2,628,051	-		PS417_12105	0.27	-2.9
2,628,084	+		PS417_12105	0.32	-0.2
2,628,105	-		PS417_12105	0.35	+2.3
2,628,461	-		PS417_12105	0.89	+2.3
2,628,461	-		PS417_12105	0.89	+1.2
2,628,580	-				+0.5
2,628,586	+				-0.4
2,629,109	+		PS417_12110	0.74	-0.2
2,629,109	+		PS417_12110	0.74	-0.2
2,629,322	-				+1.9
2,629,327	+				-0.5
2,629,418	+		PS417_12115	0.23	-0.6