Strain Fitness in Pseudomonas simiae WCS417 around PS417_12085

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,624,767	+				-0.9
2,625,173	-				-1.1
2,625,342	+				+0.5
2,625,343	-				+0.4
2,625,415	-		PS417_12085	0.30	+0.3
2,625,501	+		PS417_12085	0.56	+1.5
2,625,501	+		PS417_12085	0.56	-1.2
2,625,565	+				+1.1
2,625,565	+		PS417_12085	0.75	+0.0
2,625,565	+		PS417_12085	0.75	+1.4
2,625,565	+		PS417_12085	0.75	+0.2
2,625,565	+		PS417_12085	0.75	+0.2
2,625,566	-		PS417_12085	0.75	+1.4
2,625,642	+				-2.3
2,625,643	-				-0.7
2,625,838	+		PS417_12090	0.50	+1.2
2,625,839	-		PS417_12090	0.50	-0.1
2,625,839	-		PS417_12090	0.50	-2.0
2,625,839	-		PS417_12090	0.50	+0.8
2,626,245	+				-0.9
2,626,319	+				-3.3