Strain Fitness in Pseudomonas simiae WCS417 around PS417_11975

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,604,884	-				+0.6
2,604,884	-				-1.2
2,604,892	-				-1.9
2,605,172	-		PS417_11965	0.56	-0.4
2,605,223	+		PS417_11965	0.67	+0.1
2,605,676	+				+0.7
2,605,785	-				+0.6
2,605,813	-				-0.9
2,605,845	-				-0.2
2,605,938	-				+2.5
2,606,203	-				+2.4
2,606,203	-		PS417_11975	0.34	+2.4
2,606,239	-		PS417_11975	0.38	+1.7
2,606,258	+		PS417_11975	0.40	+1.6
2,606,259	-		PS417_11975	0.40	-0.4
2,606,302	+		PS417_11975	0.44	+0.0
2,606,396	+		PS417_11975	0.54	-0.4
2,606,534	+		PS417_11975	0.69	-0.2
2,606,535	-		PS417_11975	0.69	-0.8
2,606,619	-		PS417_11975	0.78	+0.4
2,606,619	-		PS417_11975	0.78	-1.6
2,606,619	-		PS417_11975	0.78	-3.0
2,606,717	+		PS417_11975	0.88	+1.3
2,606,718	-		PS417_11975	0.88	+2.8
2,606,718	-		PS417_11975	0.88	+0.3
2,606,718	-				+1.4
2,606,718	-		PS417_11975	0.88	-3.0
2,606,718	-		PS417_11975	0.88	+0.4
2,606,786	+				-1.5
2,606,786	+				+0.0
2,606,787	-				-0.2
2,607,024	+				+0.1
2,607,024	+				+0.1
2,607,025	-				-1.1
2,607,025	-				+1.8
2,607,025	-				-0.7
2,607,025	-				-0.3
2,607,025	-				-0.7
2,607,025	-				+0.4
2,607,365	+				+1.4
2,607,365	+				-1.0
2,607,446	+				+0.6
2,607,587	-				-0.6