Strain Fitness in Pseudomonas simiae WCS417 around PS417_11870

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,582,776	+				-0.4
2,583,034	-		PS417_11865	0.33	-1.9
2,583,350	+		PS417_11865	0.71	+1.2
2,583,351	-		PS417_11865	0.72	-0.3
2,583,351	-		PS417_11865	0.72	+0.8
2,583,648	+				+2.1
2,583,649	-				-0.6
2,583,649	-				-0.0
2,583,720	+				-1.2
2,583,721	-				-0.3
2,583,791	+				+0.6
2,583,792	-				-0.1
2,583,792	-				-1.7
2,583,792	-				-1.4
2,583,986	+		PS417_11870	0.13	+0.4
2,583,987	-		PS417_11870	0.13	-1.2
2,584,649	+		PS417_11870	0.47	+1.8
2,584,811	+		PS417_11870	0.56	+0.5
2,585,004	+		PS417_11870	0.66	+1.8
2,585,005	-		PS417_11870	0.66	+0.1
2,585,105	+		PS417_11870	0.71	+0.7
2,585,106	-		PS417_11870	0.71	+0.1
2,585,193	-		PS417_11870	0.76	-0.4
2,585,216	+		PS417_11870	0.77	+2.1
2,585,216	+		PS417_11870	0.77	+0.5
2,585,216	+		PS417_11870	0.77	+1.2
2,585,216	+		PS417_11870	0.77	+0.4
2,585,290	+		PS417_11870	0.81	+0.2
2,585,290	+		PS417_11870	0.81	+0.9
2,585,333	-		PS417_11870	0.83	+0.4
2,585,497	+				+1.4
2,585,663	+				+1.0
2,585,663	+				+1.5
2,585,684	+				+0.7
2,586,174	+		PS417_11875	0.48	+1.2
2,586,174	+		PS417_11875	0.48	+0.1
2,586,175	-		PS417_11875	0.48	+1.1
2,586,249	+		PS417_11875	0.56	+2.1
2,586,249	+		PS417_11875	0.56	+1.3
2,586,249	+		PS417_11875	0.56	-0.2
2,586,381	+		PS417_11875	0.69	-0.5
2,586,522	+		PS417_11875	0.83	+1.1
2,586,626	+				+0.1
2,586,626	+				+2.1
2,586,627	-				-0.1