Strain Fitness in Pseudomonas simiae WCS417 around PS417_11765

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,559,690	-		PS417_11760	0.81	-0.3
2,560,051	-				+0.9
2,560,079	+				+0.6
2,560,079	+				-0.6
2,560,092	-				+0.3
2,560,307	+				-0.2
2,560,308	-				+1.4
2,560,308	-				-2.6
2,560,399	+				-0.6
2,560,400	-				+1.0
2,560,621	+		PS417_11765	0.27	+1.9
2,560,622	-		PS417_11765	0.27	-0.1
2,560,641	-		PS417_11765	0.29	-2.5
2,560,892	-		PS417_11765	0.54	+2.6
2,561,075	+		PS417_11765	0.73	-1.4
2,561,076	-		PS417_11765	0.73	+0.9
2,561,116	+		PS417_11765	0.77	-0.2
2,561,320	+				+0.2
2,561,339	-				+0.4
2,561,347	+				+0.6
2,561,347	+				-0.4
2,561,382	+				+0.3
2,561,444	+				-0.2
2,561,922	+		PS417_11770	0.55	+0.5
2,561,922	+		PS417_11770	0.55	+1.4
2,561,955	+		PS417_11770	0.58	-0.1
2,561,955	+				+0.1
2,562,315	+				+1.3
2,562,316	-				+2.6