Strain Fitness in Pseudomonas simiae WCS417 around PS417_11185

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,398,281	-				-1.3
2,398,397	-		PS417_11180	0.16	+1.4
2,398,432	-		PS417_11180	0.21	-2.2
2,398,437	+		PS417_11180	0.22	-1.0
2,398,437	+		PS417_11180	0.22	+0.1
2,398,438	-		PS417_11180	0.22	+1.2
2,398,495	-		PS417_11180	0.31	-1.6
2,398,908	+				-1.6
2,398,933	-				-0.2
2,398,936	-				-1.3
2,398,941	+				-1.4
2,398,942	-				+0.4
2,399,016	-		PS417_11185	0.13	+1.7
2,399,219	+		PS417_11185	0.43	+1.2
2,399,439	+		PS417_11185	0.76	-2.2
2,399,440	-		PS417_11185	0.76	+0.3
2,399,605	+				+1.2
2,399,605	+				-0.0
2,399,606	-				+0.4
2,399,637	+				+0.1
2,399,726	+				-1.4
2,399,741	+				-0.9
2,399,741	+				+0.3
2,399,814	+		PS417_11190	0.12	+0.7
2,399,887	-		PS417_11190	0.18	-1.4
2,399,908	-		PS417_11190	0.20	-1.0
2,400,427	-		PS417_11190	0.66	-0.1
2,400,463	-		PS417_11190	0.69	-0.3
2,400,504	+		PS417_11190	0.73	+0.3
2,400,505	-		PS417_11190	0.73	+0.7