Strain Fitness in Pseudomonas simiae WCS417 around PS417_10895

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,328,470	+		PS417_10885	0.85	-0.5
2,328,470	+		PS417_10885	0.85	-0.4
2,328,470	+		PS417_10885	0.85	+0.3
2,328,471	-		PS417_10885	0.85	+0.4
2,328,726	+				+0.2
2,328,844	+		PS417_10890	0.11	-0.0
2,328,844	+		PS417_10890	0.11	-2.0
2,328,844	+		PS417_10890	0.11	-0.7
2,328,844	+		PS417_10890	0.11	-0.3
2,328,844	+				+0.4
2,328,844	+		PS417_10890	0.11	-0.1
2,328,844	+		PS417_10890	0.11	+0.5
2,328,845	-		PS417_10890	0.12	-1.2
2,328,845	-		PS417_10890	0.12	-0.0
2,328,845	-		PS417_10890	0.12	+0.5
2,329,144	+		PS417_10890	0.77	-2.2
2,329,145	-		PS417_10890	0.77	+0.0
2,329,145	-		PS417_10890	0.77	+0.0
2,329,219	+				-2.9
2,329,239	+				+1.5
2,329,240	-				-1.9
2,329,340	+				-0.9
2,329,340	+				+0.7
2,329,344	+				-0.2
2,329,345	-				-0.8
2,329,380	-				-0.3
2,329,811	+		PS417_10895	0.24	-0.9
2,329,995	-		PS417_10895	0.35	+2.0
2,330,189	+		PS417_10895	0.46	+0.3
2,330,388	+		PS417_10895	0.58	-0.2
2,330,389	-		PS417_10895	0.58	-1.6
2,330,426	+		PS417_10895	0.60	+0.9
2,330,426	+		PS417_10895	0.60	-0.5
2,330,426	+		PS417_10895	0.60	+0.4
2,330,427	-		PS417_10895	0.60	-1.4
2,330,510	+		PS417_10895	0.65	-0.4
2,330,622	+		PS417_10895	0.72	-1.2
2,330,623	-		PS417_10895	0.72	-1.0
2,330,623	-		PS417_10895	0.72	-0.6
2,330,842	+		PS417_10895	0.85	-0.6
2,330,858	-		PS417_10895	0.86	-1.1
2,331,112	+				-0.2
2,331,117	-				+0.2
2,331,117	-				-0.0
2,331,165	+				+1.8
2,331,166	-				+0.3
2,331,166	-				+0.1
2,331,516	-		PS417_10900	0.20	+1.3
2,331,516	-		PS417_10900	0.20	-0.3
2,331,568	-		PS417_10900	0.27	+0.1
2,331,683	+		PS417_10900	0.41	-1.7
2,331,684	-		PS417_10900	0.41	+0.2
2,331,687	-		PS417_10900	0.42	+1.2
2,331,740	+		PS417_10900	0.49	+2.0
2,331,741	-		PS417_10900	0.49	-0.5
2,331,863	+		PS417_10900	0.64	+0.2
2,331,863	+				+1.4
2,331,864	-		PS417_10900	0.65	-0.2