Strain Fitness in Pseudomonas simiae WCS417 around PS417_09980

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,148,976	+		PS417_09970	0.27	+0.8
2,148,976	+				+1.4
2,148,977	-		PS417_09970	0.27	-0.5
2,148,984	-		PS417_09970	0.28	+0.5
2,149,069	-		PS417_09970	0.47	+0.1
2,149,069	-		PS417_09970	0.47	+0.4
2,149,198	+		PS417_09970	0.75	+0.0
2,149,198	+		PS417_09970	0.75	-0.5
2,149,199	-		PS417_09970	0.75	+0.1
2,149,199	-		PS417_09970	0.75	+1.4
2,149,204	+		PS417_09970	0.76	+1.0
2,149,204	+		PS417_09970	0.76	+0.2
2,149,248	-		PS417_09970	0.85	+0.8
2,149,286	-				+0.9
2,149,340	+				+0.1
2,149,340	+				+0.6
2,149,340	+				-0.3
2,149,341	-				+0.0
2,149,341	-				-0.1
2,149,341	-				-0.5
2,149,341	-				-0.7
2,149,341	-				+1.4
2,149,342	+				-0.6
2,149,354	+				-1.2
2,149,501	-				+0.4
2,149,635	+		PS417_09975	0.16	+0.5
2,149,655	+		PS417_09975	0.23	-0.8
2,149,655	+		PS417_09975	0.23	-1.6
2,149,656	-		PS417_09975	0.23	+0.1
2,149,656	-		PS417_09975	0.23	+0.3
2,149,743	+		PS417_09975	0.51	+0.9
2,149,849	-		PS417_09975	0.85	-0.2
2,149,849	-		PS417_09975	0.85	-1.6
2,149,852	+		PS417_09975	0.86	+0.2
2,149,935	+				+0.3
2,149,945	+				-0.2
2,149,958	-				-1.7
2,150,006	+		PS417_09980	0.16	-0.7
2,150,047	-		PS417_09980	0.34	-0.1
2,150,047	-		PS417_09980	0.34	-1.0
2,150,054	-		PS417_09980	0.37	-0.1
2,150,135	+		PS417_09980	0.72	-0.3
2,150,169	-		PS417_09980	0.87	-0.7
2,150,169	-		PS417_09980	0.87	-0.0
2,150,169	-		PS417_09980	0.87	-2.7
2,151,158	-				-0.6