Strain Fitness in Pseudomonas simiae WCS417 around PS417_09410

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,038,088	+		PS417_09405	0.49	-2.9
2,038,513	+		PS417_09405	0.84	-1.9
2,038,786	-				+1.1
2,038,786	-				-0.9
2,038,786	-				-1.1
2,038,786	-				-0.6
2,038,786	-				-2.2
2,038,864	+				+1.0
2,038,937	+				+0.5
2,039,009	+				-1.9
2,039,072	+				-0.3
2,039,072	+				+0.1
2,039,072	+				-0.0
2,039,072	+				-2.0
2,039,072	+				-1.1
2,039,073	-				-0.0
2,039,073	-				+4.3
2,039,074	+				-0.5
2,039,075	-				+0.4
2,039,075	-				-0.3
2,039,075	-				+0.1
2,039,075	-				+1.8
2,039,075	-				+1.1
2,039,076	+				-1.2
2,039,077	-				+0.1
2,039,077	-				-0.4
2,039,100	-				-0.6
2,039,148	+		PS417_09410	0.11	+0.4
2,039,253	-		PS417_09410	0.18	+1.3
2,039,400	-		PS417_09410	0.29	+0.3
2,039,400	-		PS417_09410	0.29	-0.3
2,039,972	+		PS417_09410	0.69	+0.0
2,039,972	+		PS417_09410	0.69	+0.5
2,039,972	+		PS417_09410	0.69	-0.1
2,039,972	+		PS417_09410	0.69	-1.6
2,039,972	+		PS417_09410	0.69	-3.3
2,039,972	+		PS417_09410	0.69	+1.7
2,039,973	-		PS417_09410	0.69	+2.0
2,040,081	+		PS417_09410	0.77	-1.7
2,040,112	-		PS417_09410	0.79	+1.5
2,040,479	+		PS417_09415	0.12	+0.0
2,040,479	+		PS417_09415	0.12	-1.9
2,040,479	+		PS417_09415	0.12	+1.5
2,040,479	+		PS417_09415	0.12	+0.8
2,040,479	+		PS417_09415	0.12	-0.5
2,040,480	-		PS417_09415	0.12	-1.2
2,040,480	-		PS417_09415	0.12	+1.2
2,040,480	-		PS417_09415	0.12	+0.9
2,040,480	-		PS417_09415	0.12	-1.4
2,040,622	-		PS417_09415	0.35	-0.1
2,040,733	+		PS417_09415	0.53	+3.8
2,040,900	+		PS417_09415	0.80	-0.2
2,040,900	+		PS417_09415	0.80	-0.7
2,040,909	+		PS417_09415	0.82	-0.4
2,040,909	+		PS417_09415	0.82	+0.6
2,041,078	+				+0.7
2,041,078	+				+0.8
2,041,078	+				-0.2
2,041,079	-				-0.1
2,041,079	-				+0.5
2,041,079	-				-2.0